Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001923211.1 | Gene: | or137-5 / 100149850 | ZFINID: | ZDB-GENE-070806-26 | Length: | 310 | Species: | Danio rerio |
Alignment Length: | 247 | Identity: | 53/247 - (21%) |
---|---|---|---|
Similarity: | 85/247 - (34%) | Gaps: | 74/247 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 208 LNVTTSKV-AEDDFTQLLRMAVTSVLLGLMILVTIIGNVFVIAAIILERNLQNVANY-LVASLAV 270
Fly 271 ADLFVACLVMPLGAVYEISQGWILGPELCDIWTSCDVLCCTA------SILHLVAIAVDRYWAVT 329
Fly 330 NIDYIHS-RTSNRVFMMIFCVWTAAVIVSLA---------PQFGWKDPDYLQRIEQQKCMVSQDV 384
Fly 385 SYQVFATCCT----FYVPL-----------------LVILALYWKIYQTARK 415 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 42/223 (19%) |
TM helix 1 | 228..254 | CDD:320454 | 6/25 (24%) | ||
TM helix 2 | 261..287 | CDD:320454 | 5/26 (19%) | ||
TM helix 3 | 299..329 | CDD:320454 | 11/35 (31%) | ||
TM helix 4 | 340..362 | CDD:320454 | 6/30 (20%) | ||
TM helix 5 | 383..412 | CDD:320454 | 6/49 (12%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | |||
TM helix 6 | 747..772 | CDD:341315 | |||
TM helix 7 | 784..809 | CDD:341315 | |||
or137-5 | XP_001923211.1 | 7tm_4 | 22..>147 | CDD:304433 | 31/135 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24247 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |