Sequence 1: | NP_001356890.1 | Gene: | 5-HT1A / 37196 | FlyBaseID: | FBgn0004168 | Length: | 846 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005159986.1 | Gene: | htr1fb / 100004819 | ZFINID: | ZDB-GENE-090312-140 | Length: | 372 | Species: | Danio rerio |
Alignment Length: | 617 | Identity: | 152/617 - (24%) |
---|---|---|---|
Similarity: | 220/617 - (35%) | Gaps: | 277/617 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 219 DFTQLL--RMAVTSVLLGL----MILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVAC 277
Fly 278 LVMPLGAVYEISQGWILGPELCDIWTSCDVLCCTASILHLVAIAVDRYWAVTN-IDYIHSRTSNR 341
Fly 342 VFMMIFCVWTAAVIVSLA-------PQFGWKDPDYLQRIEQQKCMVSQD-VSYQVFATCCTFYVP 398
Fly 399 LLVILALYWKIYQTARKRIHRRRPRPVDAAVNNNQPDGGAATDTKLHRLRLRLGRFSTAKSKTGS 463
Fly 464 AVGVSGPASGGRALGLVDGNSTNTVNTVEDTEFSSSNVDSKSRAGVEAPSTSGNQIATVSHLVAL 528
Fly 529 AKQQGKSTAKSSAAVNGMAPSGRQEDDGQRPEHGEQEDREELEDQDEQVGPQPTTATSAMTAAGT 593
Fly 594 NESEDQCKANGVEVLEDPQLQQQLEQVQQLQKSVKSGGGGGASTSNATTITSISALSPQTPTSQG 658
Fly 659 VGIAAAAAGPMTAKTSTLTSCNQSHPLCGTANESPSTPEPRSRQPTTPQQQPHQQAHQQQQQQQQ 723
Fly 724 LSSIANPMQKVNKRKETLEAKRERKAAKTLAIITGAFVVCWLPFFVMALTMPLCAACQISDSVAS 788
Fly 789 LFLWLGYFNSTLNPVIYTIFSPEFRQAFKRIL 820 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1A | NP_001356890.1 | 7tmA_5-HT1A_invertebrates | 227..>413 | CDD:320454 | 84/198 (42%) |
TM helix 1 | 228..254 | CDD:320454 | 9/29 (31%) | ||
TM helix 2 | 261..287 | CDD:320454 | 17/25 (68%) | ||
TM helix 3 | 299..329 | CDD:320454 | 19/29 (66%) | ||
TM helix 4 | 340..362 | CDD:320454 | 9/28 (32%) | ||
TM helix 5 | 383..412 | CDD:320454 | 15/29 (52%) | ||
7tm_GPCRs | <743..816 | CDD:355774 | 37/72 (51%) | ||
TM helix 6 | 747..772 | CDD:341315 | 17/24 (71%) | ||
TM helix 7 | 784..809 | CDD:341315 | 13/24 (54%) | ||
htr1fb | XP_005159986.1 | 7tm_1 | 41..349 | CDD:278431 | 135/569 (24%) |
7tm_4 | 41..>165 | CDD:304433 | 60/123 (49%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D310620at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |