DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT1B and 5-HT7

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001263131.1 Gene:5-HT7 / 43669 FlyBaseID:FBgn0004573 Length:564 Species:Drosophila melanogaster


Alignment Length:675 Identity:199/675 - (29%)
Similarity:282/675 - (41%) Gaps:233/675 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 AMAAGDDDVPASILEIELPAILLNE----SLFI-------------------------------E 37
            |.|||...|||.::|.|..:....:    |.|:                               .
  Fly    47 AYAAGKATVPAPLVEGETESATSQDFNSSSAFLGAIASASSTGSGSGSGSGSGSGSGSGSYGLAS 111

  Fly    38 LNGNLTQLVD----TTSNLSQIVWNRSINGNGNSNTFDLVDDE---QERAAVEFWL-LVKMIAMA 94
            :|.:...:|.    |:|||          |:.|:....|.|..   :|.||.||.| .:..|.::
  Fly   112 MNSSPIAIVSYQGITSSNL----------GDSNTTLVPLSDTPLLLEEFAAGEFVLPPLTSIFVS 166

  Fly    95 VVLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNGWILG 159
            :||.::||.|::|||.|..|:.:.|.|:...|||:.|||::||.||.||||:..:||:...|..|
  Fly   167 IVLLIVILGTVVGNVLVCIAVCMVRKLRRPCNYLLVSLALSDLCVALLVMPMALLYEVLEKWNFG 231

  Fly   160 PELCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLA 223
            |.|||||.|.||||||||||:|.||:.|||..:|. ::|...|||||:.|.:..||.||..:||.
  Fly   232 PLLCDIWVSFDVLCCTASILNLCAISVDRYLAITKPLEYGVKRTPRRMMLCVGIVWLAAACISLP 296

  Fly   224 PQ--FGWKDPDYMKRIEEQH--CMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRI--Q 282
            |.  .|.:..|     ||..  |.|.|:..|||:||..:||:||.|:||:|::|:..||:.:  :
  Fly   297 PLLILGNEHED-----EEGQPICTVCQNFAYQIYATLGSFYIPLSVMLFVYYQIFRAARRIVLEE 356

  Fly   283 RRAQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRIC 347
            :|||......|..|...||                     .:.|..|                  
  Fly   357 KRAQTHLQQALNGTGSPSA---------------------PQAPPLG------------------ 382

  Fly   348 FGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTS-NYDNKSHAG-TELTTVSSDA 410
                                                 .||.::| |....|..| |.||      
  Fly   383 -------------------------------------HTELASSGNGQRHSSVGNTSLT------ 404

  Fly   411 DDYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKALSGAGTV 475
              |.|                                     .||:.            ||.|.:
  Fly   405 --YST-------------------------------------CGGLS------------SGGGAL 418

  Fly   476 AGAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAAQTLAIIT 540
            ||..:||..|||             .||      :.:||.|..:    .:..:|:||:.||.||.
  Fly   419 AGHGSGGGVSGS-------------TGL------LGSPHHKKLR----FQLAKEKKASTTLGIIM 460

  Fly   541 GAFVICWLPFFVMALTMSLCKECEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRILFG 605
            .||.:||||||::||.... :...:..:::||||||||.||.|||:||...|.:||:.|:.||: 
  Fly   461 SAFTVCWLPFFILALIRPF-ETMHVPASLSSLFLWLGYANSLLNPIIYATLNRDFRKPFQEILY- 523

  Fly   606 RKAAARARSAKIXFQLKDN--EDQY 628
                  .|.:.:...:::|  :|||
  Fly   524 ------FRCSSLNTMMRENYYQDQY 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 89/187 (48%)
5-HT7NP_001263131.1 7tm_4 173..>342 CDD:304433 85/173 (49%)
7tm_1 179..507 CDD:278431 153/489 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470086
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BCYC
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002041
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
65.870

Return to query results.
Submit another query.