DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and adra2a

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_997520.3 Gene:adra2a / 266750 ZFINID:ZDB-GENE-021010-1 Length:388 Species:Danio rerio


Alignment Length:528 Identity:146/528 - (27%)
Similarity:215/528 - (40%) Gaps:159/528 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 AAVEFWLLVKMIAMAVVLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVM 144
            |..|:.||| .:.::|.:||:||:.|.|||.||.|:...|.|:...|..:.|||.||:.||.|||
Zfish    13 ATKEYTLLV-ALPLSVAVGLLILLIIFGNVLVIIAVFTSRALRAPQNLFLVSLASADILVATLVM 76

  Fly   145 PLGAVYEISNGWILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFL 208
            |.....|:...|..|...|:|:.:.|||.|||||.||.||:.||||::|. |:||..|||:|:..
Zfish    77 PFSLANELMGMWTFGGVWCEIYLALDVLFCTASITHLCAISLDRYWSITQAIEYNLKRTPQRIKR 141

  Fly   209 MIFCVWFAALIVSLAPQFGWKDPDYMKRIEEQHCMVSQDVGYQIFATCCTFYVPLLVILFLYWKI 273
            :||.||..|.::|..|..      .||:.|...|.::::..|.:.:...:|::|.::::.:|.:|
Zfish   142 IIFIVWIIAAVISCPPLI------TMKKSEGDICDINKEKWYIVSSCIGSFFLPCIIMVLVYIRI 200

  Fly   274 YIIARKRIQRRAQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQR 338
            |.||:||  .||...          |....|:.|:.:....:...::..|  |.|.|...|    
Zfish   201 YQIAKKR--TRAPPG----------DHRKNEVGKKENDPHEKLNGIQNAE--PDDKDEING---- 247

  Fly   339 RTRKRMRICFGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTEL 403
                                                      :..||                  
Zfish   248 ------------------------------------------VDMEE------------------ 252

  Fly   404 TTVSSDADDYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKA 468
                |.:.|::.||...:...|.:.         .:.|:.|.|                      
Zfish   253 ----SSSSDHKVSNPCSLKKKSSKG---------KTKLSQIKP---------------------- 282

  Fly   469 LSGAGTVAGAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAA 533
                           |.|...|...|...:...|                  ||    .||::..
Zfish   283 ---------------GDGDKTEACQTTKASRWKG------------------RQ----NREKRFT 310

  Fly   534 QTLAIITGAFVICWLPFFVMALTMSLCKECEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRA 598
            ..||::.|.|||||.|||......:.| :|.:...:...|.|.||.||:|||:||||||.:|||:
Zfish   311 FVLAVVIGVFVICWFPFFFTYTFTAFC-DCCVPETLFKFFFWFGYCNSSLNPIIYTIFNNDFRRS 374

  Fly   599 FKRILFGR 606
            ||:||..|
Zfish   375 FKKILCRR 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 72/181 (40%)
adra2aNP_997520.3 7tm_4 31..>165 CDD:304433 62/139 (45%)
7tm_1 39..364 CDD:278431 121/481 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..291 23/208 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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