Sequence 1: | NP_001137708.2 | Gene: | 5-HT1B / 37191 | FlyBaseID: | FBgn0263116 | Length: | 629 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036984.1 | Gene: | Htr1d / 25323 | RGDID: | 2847 | Length: | 374 | Species: | Rattus norvegicus |
Alignment Length: | 568 | Identity: | 157/568 - (27%) |
---|---|---|---|
Similarity: | 227/568 - (39%) | Gaps: | 214/568 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 52 LSQIVWNRSINGNGNSNTFDLVDDEQERAAVEFW----LLVKMIAMAVVLGLMILVTIIGNVFVI 112
Fly 113 AAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNGWILGPELCDIWTSCDVLCCTAS 177
Fly 178 ILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLAPQFGWKDPDYMKRIEEQH 241
Fly 242 CMV-SQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRIQRRAQKSFNVTLTETDCDSAVREL 305
Fly 306 KKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRICFGRNTNTANVVAGSEGAVARSMA 370
Fly 371 AIAVDFASLAITREETEFSTSNYDNKSHAGTELTTVSSDADDYRTSNANEIITLSQQVAHATQHH 435
Fly 436 LIASHL--NAI-TPLAQSIAMGGVGCLTTTTPSEKALSGAGTVAGAVAGGSGSGSGEEGAGTEGK 497
Fly 498 NAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAAQTLAIITGAFVICWLPFFVMALTMSLCKE 562
Fly 563 -CEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRILFGRKAA 609 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1B | NP_001137708.2 | 7tm_1 | 107..>288 | CDD:278431 | 74/182 (41%) |
Htr1d | NP_036984.1 | 7tmA_5-HT1B_1D | 32..364 | CDD:320455 | 142/517 (27%) |
TM helix 1 | 38..62 | CDD:320455 | 9/23 (39%) | ||
TM helix 2 | 71..93 | CDD:320455 | 13/21 (62%) | ||
TM helix 3 | 109..131 | CDD:320455 | 15/21 (71%) | ||
Agonist binding. /evidence=ECO:0000250 | 111..120 | 4/8 (50%) | |||
DRY motif, important for ligand-induced conformation changes. /evidence=ECO:0000250 | 132..134 | 1/1 (100%) | |||
TM helix 4 | 154..170 | CDD:320455 | 5/15 (33%) | ||
TM helix 5 | 192..215 | CDD:320455 | 8/22 (36%) | ||
TM helix 6 | 297..319 | CDD:320455 | 15/21 (71%) | ||
Agonist binding. /evidence=ECO:0000250 | 311..315 | 3/3 (100%) | |||
TM helix 7 | 332..357 | CDD:320455 | 14/24 (58%) | ||
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250 | 349..353 | 3/3 (100%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353595 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D310620at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.850 |