DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment 5-HT1B and DRD5

DIOPT Version :10

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_000789.1 Gene:DRD5 / 1816 HGNCID:3026 Length:477 Species:Homo sapiens


Alignment Length:553 Identity:123/553 - (22%)
Similarity:187/553 - (33%) Gaps:260/553 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IAMAVVLGLMILVTIIGNVFVIAAIILERNLQ-NVANYLVASLAVADLFVACLVMPLGAVYEISN 154
            :..|.:|.|:|:.|::|||.|.|||:..|:|: |:.|..:.||||:|||||.||||..||.|::.
Human    41 VVTACLLTLLIIWTLLGNVLVCAAIVRSRHLRANMTNVFIVSLAVSDLFVALLVMPWKAVAEVAG 105

  Fly   155 GWILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAAL 218
            .|..| ..||:|.:.|::|.|||||:|..|:.||||.::. ..|....|.|...:|:...|..::
Human   106 YWPFG-AFCDVWVAFDIMCSTASILNLCVISVDRYWAISRPFRYKRKMTQRMALVMVGLAWTLSI 169

  Fly   219 IVSLAP-QFGWK---------------------------DPDYMKRIEEQHCMVSQDVGYQIFAT 255
            ::|..| |..|.                           :||    :..::|..|.:..|.|.::
Human   170 LISFIPVQLNWHRDQAASWGGLDLPNNLANWTPWEEDFWEPD----VNAENCDSSLNRTYAISSS 230

  Fly   256 CCTFYVPLLVILFLYWKIYIIARKRIQRRAQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLE 320
            ..:||:|:.:::..|.:||.||:.:|:|                  :..|  ||:...|:.    
Human   231 LISFYIPVAIMIVTYTRIYRIAQVQIRR------------------ISSL--ERAAEHAQS---- 271

  Fly   321 AGERTPVDGDGTGGQLQRRTRKRMRICFGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREE 385
                                                         .||.||.|.|          
Human   272 ---------------------------------------------CRSSAACAPD---------- 281

  Fly   386 TEFSTSNYDNKSHAGTELTTVSSDADDYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQS 450
                                                                       |.|..|
Human   282 -----------------------------------------------------------TSLRAS 287

  Fly   451 IAMGGVGCLTTTTPSEKALSGAGTVAGAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQ 515
            |                                                                
Human   288 I---------------------------------------------------------------- 288

  Fly   516 KLAKRRQLLEAKRERKAAQTLAIITGAFVICWLPFFVMALTMSLCK----------ECEIHTAVA 570
                       |:|.|..:||::|.|.||.||||||::...:..|.          .|...|.. 
Human   289 -----------KKETKVLKTLSVIMGVFVCCWLPFFILNCMVPFCSGHPEGPPAGFPCVSETTF- 341

  Fly   571 SLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRIL 603
            .:|:|.|:.||:||||||. ||.:|::.|.::|
Human   342 DVFVWFGWANSSLNPVIYA-FNADFQKVFAQLL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 TM helix 1 92..118 CDD:320454 12/25 (48%)
TM helix 2 125..151 CDD:320454 16/25 (64%)
TM helix 3 163..193 CDD:320454 16/29 (55%)
TM helix 4 204..226 CDD:320454 5/22 (23%)
TM helix 5 247..276 CDD:320454 8/28 (29%)
7tm_GPCRs <525..599 CDD:475119 32/83 (39%)
TM helix 6 533..555 CDD:410628 12/21 (57%)
TM helix 7 567..592 CDD:410628 12/24 (50%)
7tmA_5-HT1A_invertebrates 91..>287 CDD:320454 75/225 (33%)
DRD5NP_000789.1 7tm_GPCRs 41..369 CDD:475119 121/547 (22%)
TM helix 1 43..67 CDD:410628 12/23 (52%)
TM helix 2 77..99 CDD:410628 14/21 (67%)
TM helix 3 114..136 CDD:410628 11/21 (52%)
TM helix 4 159..175 CDD:410628 3/15 (20%)
TM helix 5 223..246 CDD:410628 5/22 (23%)
TM helix 6 295..317 CDD:410628 12/21 (57%)
TM helix 7 338..363 CDD:410628 13/26 (50%)

Return to query results.
Submit another query.