DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and DRD1

DIOPT Version :10

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_000785.1 Gene:DRD1 / 1812 HGNCID:3020 Length:446 Species:Homo sapiens


Alignment Length:530 Identity:127/530 - (23%)
Similarity:186/530 - (35%) Gaps:225/530 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 IAMAVVLGLMILVTIIGNVFVIAAIILERNLQN-VANYLVASLAVADLFVACLVMPLGAVYEISN 154
            |..|..|.|:||.|::||..|.||:|..|:|:: |.|:.|.||||:||.||.||||..||.||:.
Human    24 ILTACFLSLLILSTLLGNTLVCAAVIRFRHLRSKVTNFFVISLAVSDLLVAVLVMPWKAVAEIAG 88

  Fly   155 GWILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAAL 218
            .|..| ..|:||.:.|::|.|||||:|..|:.||||.::: ..|....||:..|::|...|..::
Human    89 FWPFG-SFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSV 152

  Fly   219 IVSLAP-QFGW--------KDPDYMKRIEE-QHCMVSQDVGYQIFATCCTFYVPLLVILFLYWKI 273
            ::|..| |..|        .|.:.....|. .:|..|....|.|.::..:||:|:.:::..|.:|
Human   153 LISFIPVQLSWHKAKPTSPSDGNATSLAETIDNCDSSLSRTYAISSSVISFYIPVAIMIVTYTRI 217

  Fly   274 YIIARKRIQRRAQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQR 338
            |.||:|:|:|                                                       
Human   218 YRIAQKQIRR------------------------------------------------------- 227

  Fly   339 RTRKRMRICFGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTEL 403
                                                                             
Human   228 ----------------------------------------------------------------- 227

  Fly   404 TTVSSDADDYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKA 468
                             |..|.:...||.                        .|.|||      
Human   228 -----------------IAALERAAVHAK------------------------NCQTTT------ 245

  Fly   469 LSGAGTVAGAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAA 533
                           |:|...|                   .:.|.....     :..|||.|..
Human   246 ---------------GNGKPVE-------------------CSQPESSFK-----MSFKRETKVL 271

  Fly   534 QTLAIITGAFVICWLPFFVMALTMSLCKECE-----IHTAVASLFLWLGYFNSTLNPVIYTIFNP 593
            :||::|.|.||.||||||::...:..|...|     |.:....:|:|.|:.||:|||:||. ||.
Human   272 KTLSVIMGVFVCCWLPFFILNCILPFCGSGETQPFCIDSNTFDVFVWFGWANSSLNPIIYA-FNA 335

  Fly   594 EFRRAFKRIL 603
            :||:||..:|
Human   336 DFRKAFSTLL 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 TM helix 1 92..118 CDD:320454 12/25 (48%)
TM helix 2 125..151 CDD:320454 16/25 (64%)
TM helix 3 163..193 CDD:320454 16/29 (55%)
TM helix 4 204..226 CDD:320454 5/22 (23%)
TM helix 5 247..276 CDD:320454 8/28 (29%)
7tm_GPCRs <525..599 CDD:475119 33/78 (42%)
TM helix 6 533..555 CDD:410628 12/21 (57%)
TM helix 7 567..592 CDD:410628 10/24 (42%)
7tmA_5-HT1A_invertebrates 91..>287 CDD:320454 79/207 (38%)
DRD1NP_000785.1 7tmA_D1A_dopamine_R 23..341 CDD:320443 124/524 (24%)
TM helix 1 25..51 CDD:320443 12/25 (48%)
TM helix 2 59..86 CDD:320443 16/26 (62%)
TM helix 3 96..126 CDD:320443 16/29 (55%)
TM helix 4 138..161 CDD:320443 5/22 (23%)
TM helix 5 191..221 CDD:320443 8/29 (28%)
TM helix 6 265..295 CDD:320443 16/29 (55%)
TM helix 7 310..335 CDD:320443 11/25 (44%)

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