DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and Htr7

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001334371.1 Gene:Htr7 / 15566 MGIID:99841 Length:470 Species:Mus musculus


Alignment Length:534 Identity:127/534 - (23%)
Similarity:194/534 - (36%) Gaps:211/534 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VKMIAMAVVLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEI 152
            |:.:.:..:|.|:.|:||.||..|:.::...:.|:..:|||:.|||:|||.||..|||..:|.::
Mouse    82 VEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAVMPFVSVTDL 146

  Fly   153 SNG-WILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWF 215
            ..| ||.|...|:::.:.||:||||||:.|..|:.|||..:|. :.|...:..:.:..||..||.
Mouse   147 IGGKWIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVWL 211

  Fly   216 AALIVSLAPQFGWKDPDYMKRIEEQHCMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKR 280
            .:..::|.|.|||.    ....:::.|::|||.||.|::|...||:|:.|:||:|::||..||| 
Mouse   212 LSASITLPPLFGWA----QNVNDDKVCLISQDFGYTIYSTAVAFYIPMSVMLFMYYQIYKAARK- 271

  Fly   281 IQRRAQKSFNVTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMR 345
                               ||.:.                                         
Mouse   272 -------------------SAAKH----------------------------------------- 276

  Fly   346 ICFGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTELTTVSSDA 410
                                         .|:.....:.|:..|                     
Mouse   277 -----------------------------KFSGFPRVQPESVIS--------------------- 291

  Fly   411 DDYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKALSGAGTV 475
                   .|.::.|.::|........:..|                                   
Mouse   292 -------LNGVVKLQKEVEECANLSRLLKH----------------------------------- 314

  Fly   476 AGAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAAQTLAIIT 540
                               |.||..:                        .|||:|||.||.||.
Mouse   315 -------------------ERKNISI------------------------FKREQKAATTLGIIV 336

  Fly   541 GAFVICWLPFFVMALTMS-LC-KECE-IHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRI 602
            |||.:||||||:::.... :| ..|. |...|....|||||.||.:||.||..||.:.|..::.:
Mouse   337 GAFTVCWLPFFLLSTARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSL 401

  Fly   603 L------FGRKAAA 610
            |      ..||.:|
Mouse   402 LQCQYRNINRKLSA 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 68/182 (37%)
Htr7NP_001334371.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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