DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and Drd4

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_031904.1 Gene:Drd4 / 13491 MGIID:94926 Length:387 Species:Mus musculus


Alignment Length:520 Identity:138/520 - (26%)
Similarity:204/520 - (39%) Gaps:176/520 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 AMAVVLGLMIL-VTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNG 155
            |.|:|.|:::: :.:.||..|..::..||.||...||.:.|||.|||.:|.||:||....|:..|
Mouse    32 AAALVGGVLLIGLVLAGNSLVCVSVASERTLQTPTNYFIVSLAAADLLLAVLVLPLFVYSEVQGG 96

  Fly   156 -WILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVT-NIDYNNLRTPRRVFLMIFCVWFAAL 218
             |:|.|.|||...:.||:.|||||.:|.||:.||:..|| .:.||  :..:...|:|...|..:.
Mouse    97 VWLLSPRLCDTLMAMDVMLCTASIFNLCAISVDRFVAVTVPLRYN--QQGQCQLLLIAATWLLSA 159

  Fly   219 IVSLAPQFGWKD-PDYMKRIEEQHCMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRIQ 282
            .|:.....|..| |.   |.....|:.::|  |.::::.|:|::|..::|.|||..:     |..
Mouse   160 AVASPVVCGLNDVPG---RDPAVCCLENRD--YVVYSSVCSFFLPCPLMLLLYWATF-----RGL 214

  Fly   283 RRAQKSFNVTLTETDCDSAVRELK-KERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRI 346
            ||.:              |.|..| ..|:.||      .:|...|| .|.|.|..          
Mouse   215 RRWE--------------AARHTKLHSRAPRR------PSGPGPPV-SDPTQGPF---------- 248

  Fly   347 CFGRNTNTANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTELTTVSSDAD 411
                                                          :.:.......|.|..||:.
Mouse   249 ----------------------------------------------FPDCPPPLPSLRTSPSDSS 267

  Fly   412 DYRTSNANEIITLSQQVAHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKALSGAGTVA 476
            ...:.       |||:                  |.:.       |||...              
Mouse   268 RPESE-------LSQR------------------PCSP-------GCLLAD-------------- 286

  Fly   477 GAVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAK---RERKAAQTLAI 538
                                           |::..|.:..::||:  .||   |||||.:.|.:
Mouse   287 -------------------------------AALPQPPEPSSRRRR--GAKITGRERKAMRVLPV 318

  Fly   539 ITGAFVICWLPFFVMALTMSLCKECEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRIL 603
            :.|||::||.||||:.:|.:||..|.:...:.|...||||.||.|||:||||||.|||..|::.|
Mouse   319 VVGAFLVCWTPFFVVHITRALCPACFVSPRLVSAVTWLGYVNSALNPIIYTIFNAEFRSVFRKTL 383

  Fly   604  603
            Mouse   384  383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 65/183 (36%)
Drd4NP_031904.1 7tm_1 48..368 CDD:278431 123/487 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..247 9/29 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 287..306 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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