DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and Dop2R

DIOPT Version :10

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_061499915.1 Gene:Dop2R / 1274598 VectorBaseID:AGAMI1_010373 Length:659 Species:Anopheles gambiae


Alignment Length:683 Identity:204/683 - (29%)
Similarity:297/683 - (43%) Gaps:167/683 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKTVTTAMAAGDDDV-----PA------------------SILEIELPAILLNE---SLFIELN 39
            ||..|::.:|:.|.|.     ||                  ||.|      ||.|   |:|...|
Mosquito    61 MLSNVSSNVASNDTDQYYADDPAPYNDSLESPISDSTDSRGSIFE------LLAEDIGSIFYNAN 119

  Fly    40 GNLTQLVDTTSNLSQIVWNRSINGNGNSNTFDLVDDEQERAAVEFWLLVKMIAMAVVLGLMILVT 104
            |....  |||.    :..|.|:     |||..:...|.:.  ..:|.|        :|.|..::|
Mosquito   120 GTFGN--DTTG----LAVNCSL-----SNTTCIGPTEAKE--YHYWCL--------ILVLFPILT 163

  Fly   105 IIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNG-WILGPELCDIWTS 168
            :.|||.||.|:..||.||.|.||.:.|||:|||.||.:|||. |||.:.|| |.|....||.:.:
Mosquito   164 LFGNVLVILAVCRERTLQTVTNYFIVSLAIADLLVAVVVMPF-AVYVLVNGAWTLPNFACDFYIA 227

  Fly   169 CDVLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLAPQFGW---- 228
            .||:|.|:||.:||||:.|||..||. |.|...:..|||.|.|..||..:..:......|.    
Mosquito   228 MDVICSTSSIFNLVAISIDRYIAVTQPIKYAKHKNSRRVCLTILLVWAISAAIGSPIVLGLNNTQ 292

  Fly   229 -KDPDYMKRIEEQHCMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRI--QRRAQKSFN 290
             :.||.        | |..:..:.::::..:||:|.::::||||.|:...|.|.  ||.|:|.. 
Mosquito   293 DRSPDL--------C-VFYNTDFIVYSSLTSFYIPCIIMVFLYWNIFKALRTRAKKQRAARKPH- 347

  Fly   291 VTLTETDCDSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRIC--FGRNTN 353
              |:|.....::.|       ..|:.|||   ..|.:||.         ||...:|.  ..|.||
Mosquito   348 --LSEITAGGSIIE-------NIAQTKRL---AETQLDGS---------TRSGSKILPDEERPTN 391

  Fly   354 TANVVAGSEGAVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTELTTVSSDADD--YRTS 416
            ||   :||......:..:..:|...:.:..:.|||.             |.||..:|.:  :.||
Mosquito   392 TA---SGSNEEDDENAGSPDIDDCHVIVNDKSTEFM-------------LATVVEEAGNKSFSTS 440

  Fly   417 NANEI--ITLSQQVAHATQHHLIASHLNAITP--LAQSIAMGGVGCLTTTTPSEKALSGAGTVAG 477
            ..:.:  |..:|||.....    .:|.:...|  :|.::|      :..|.|....::....|..
Mosquito   441 TFSVVAQIATTQQVPSDPN----GNHDSGYAPSSIADALA------VNATPPESLNVTATVIVNK 495

  Fly   478 AVAGGSGSGSGEEGAGTEGKNAGVGLGGVLASI-------------------------------- 510
            :....|.:||..:.|....|...:...||..::                                
Mosquito   496 SATIRSRNGSPRKEASVTLKPLSLVRCGVQQALTLNRNDSTLSTNSRDSSRKDKKNTQASRFTIY 560

  Fly   511 -ANPHQKLAKRRQLLEAKRERKAAQTLAIITGAFVICWLPFFVMALTMSLC----KECEIHTAVA 570
             .|...|  |:|:...||:||||.:||||:.|.|:.||:|||...:..::|    |:|.....:.
Mosquito   561 KVNKASK--KKREKSSAKKERKATKTLAIVLGVFLFCWVPFFTCNIMDAMCAKLDKDCRPGVTIF 623

  Fly   571 SLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRIL 603
            :|..||||.||.:|||||||||||||:|||:|:
Mosquito   624 NLTTWLGYMNSFVNPVIYTIFNPEFRKAFKKIM 656

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 TM helix 1 92..118 CDD:320454 9/25 (36%)
TM helix 2 125..151 CDD:320454 15/25 (60%)
TM helix 3 163..193 CDD:320454 15/29 (52%)
TM helix 4 204..226 CDD:320454 7/21 (33%)
TM helix 5 247..276 CDD:320454 8/28 (29%)
7tm_GPCRs <525..599 CDD:475119 40/77 (52%)
TM helix 6 533..555 CDD:410628 11/21 (52%)
TM helix 7 567..592 CDD:410628 14/24 (58%)
7tmA_5-HT1A_invertebrates 91..>287 CDD:320454 78/204 (38%)
Dop2RXP_061499915.1 None

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