| Sequence 1: | NP_001137708.2 | Gene: | 5-HT1B / 37191 | FlyBaseID: | FBgn0263116 | Length: | 629 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005158304.1 | Gene: | LOC101885642 / 101885642 | -ID: | - | Length: | 353 | Species: | Danio rerio |
| Alignment Length: | 258 | Identity: | 54/258 - (20%) |
|---|---|---|---|
| Similarity: | 92/258 - (35%) | Gaps: | 75/258 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 91 IAMAVVLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEIS-- 153
Fly 154 --NGWILGPELCDIWTS----------CDVL------CCTASILHLVAIAADRYWTVTN-IDYNN 199
Fly 200 LRTPRRVFLMIFCVWFAALIVSLAPQFGWKDPDYMKRIEEQHCMVSQDVG--YQIFATCCTFYVP 262
Fly 263 LLVILFLYWKIYII----------------------ARKRIQRRAQKSFNVTLTETDCDSAVR 303 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT1B | NP_001137708.2 | TM helix 1 | 92..118 | CDD:320454 | 7/25 (28%) |
| TM helix 2 | 125..151 | CDD:320454 | 13/25 (52%) | ||
| TM helix 3 | 163..193 | CDD:320454 | 7/45 (16%) | ||
| TM helix 4 | 204..226 | CDD:320454 | 4/21 (19%) | ||
| TM helix 5 | 247..276 | CDD:320454 | 5/30 (17%) | ||
| 7tm_GPCRs | <525..599 | CDD:475119 | |||
| TM helix 6 | 533..555 | CDD:410628 | |||
| TM helix 7 | 567..592 | CDD:410628 | |||
| 7tmA_5-HT1A_invertebrates | 91..>287 | CDD:320454 | 49/240 (20%) | ||
| LOC101885642 | XP_005158304.1 | 7tm_classA_rhodopsin-like | 21..310 | CDD:410626 | 53/256 (21%) |
| TM helix 1 | 21..46 | CDD:410626 | 7/24 (29%) | ||
| TM helix 2 | 53..79 | CDD:410626 | 13/25 (52%) | ||
| TM helix 3 | 104..134 | CDD:410626 | 5/29 (17%) | ||
| TM helix 4 | 147..166 | CDD:410626 | 3/18 (17%) | ||
| TM helix 5 | 195..221 | CDD:410626 | 3/25 (12%) | ||
| TM helix 6 | 249..279 | CDD:410626 | |||
| TM helix 7 | 287..310 | CDD:410626 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||