Sequence 1: | NP_001137708.2 | Gene: | 5-HT1B / 37191 | FlyBaseID: | FBgn0263116 | Length: | 629 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002936251.2 | Gene: | htr1b / 100495915 | XenbaseID: | XB-GENE-988006 | Length: | 385 | Species: | Xenopus tropicalis |
Alignment Length: | 566 | Identity: | 151/566 - (26%) |
---|---|---|---|
Similarity: | 235/566 - (41%) | Gaps: | 193/566 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 41 NLTQLVDTTSNLSQIVWNRSINGNGNSNTFDLVDDEQERAAVEFWLLVKMIAMAVVLGLMILVTI 105
Fly 106 IGNVFVIAAIILERNLQNVANYLVASLAVADLFVACLVMPLGAVYEISNGWILGPELCDIWTSCD 170
Fly 171 VLCCTASILHLVAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLAPQFGWKDPDYM 234
Fly 235 KRIEEQHCMVSQD-VGYQIFATCCTFYVPLLVILFLYWKIYIIARKRIQRRAQKSFNVTLTETDC 298
Fly 299 DSAVRELKKERSKRRAERKRLEAGERTPVDGDGTGGQLQRRTRKRMRICFGRNTNTANVVAGSEG 363
Fly 364 AVARSMAAIAVDFASLAITREETEFSTSNYDNKSHAGTELTTVSSDADDYRTSNANEIITLSQQV 428
Fly 429 AHATQHHLIASHLNAITPLAQSIAMGGVGCLTTTTPSEKALSGAGTVAGAVAGGSGSGSGEEGAG 493
Fly 494 TEGKNAGVGLGGVLASIANPHQKLAKRRQLLEAKRERKAAQTLAIITGAFVICWLPFFVMALTMS 558
Fly 559 LCKE-CEIHTAVASLFLWLGYFNSTLNPVIYTIFNPEFRRAFKRIL 603 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
5-HT1B | NP_001137708.2 | 7tm_1 | 107..>288 | CDD:278431 | 78/182 (43%) |
htr1b | XP_002936251.2 | 7tmA_5-HT1B_1D | 42..374 | CDD:320455 | 139/514 (27%) |
TM helix 1 | 47..73 | CDD:320455 | 9/25 (36%) | ||
TM helix 2 | 80..106 | CDD:320455 | 15/25 (60%) | ||
TM helix 3 | 118..148 | CDD:320455 | 20/29 (69%) | ||
TM helix 4 | 160..183 | CDD:320455 | 8/23 (35%) | ||
TM helix 5 | 200..229 | CDD:320455 | 10/28 (36%) | ||
TM helix 6 | 301..331 | CDD:320455 | 17/29 (59%) | ||
TM helix 7 | 342..367 | CDD:320455 | 13/24 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D310620at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3253 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.950 |