| Sequence 1: | NP_001137708.2 | Gene: | 5-HT1B / 37191 | FlyBaseID: | FBgn0263116 | Length: | 629 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002665989.2 | Gene: | or93a1 / 100331132 | ZFINID: | ZDB-GENE-070806-34 | Length: | 320 | Species: | Danio rerio |
| Alignment Length: | 278 | Identity: | 53/278 - (19%) |
|---|---|---|---|
| Similarity: | 100/278 - (35%) | Gaps: | 84/278 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 39 NGNLTQLV-------DTTSNLSQIVWNRSINGNGNSNTFDLVDDEQERAAVEFWLLVKMI----A 92
Fly 93 MAVVLGLMILVTIIGNVFVIAAIILERNLQNVANYLVASLAVADLFV---ACLVMPLG--AVYEI 152
Fly 153 SNGWILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVT-NIDYNNLRTPRRVFLMIFCVWFA 216
Fly 217 ALIVSLAPQFGWKDPDYMKRIEEQHCMVSQDVGYQIF-----ATCCTFYVPL-LVILFLYWKIYI 275
Fly 276 IAR-----KRIQRRAQKS 288 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| 5-HT1B | NP_001137708.2 | TM helix 1 | 92..118 | CDD:320454 | 3/25 (12%) |
| TM helix 2 | 125..151 | CDD:320454 | 7/30 (23%) | ||
| TM helix 3 | 163..193 | CDD:320454 | 4/29 (14%) | ||
| TM helix 4 | 204..226 | CDD:320454 | 6/21 (29%) | ||
| TM helix 5 | 247..276 | CDD:320454 | 9/34 (26%) | ||
| 7tm_GPCRs | <525..599 | CDD:475119 | |||
| TM helix 6 | 533..555 | CDD:410628 | |||
| TM helix 7 | 567..592 | CDD:410628 | |||
| 7tmA_5-HT1A_invertebrates | 91..>287 | CDD:320454 | 40/216 (19%) | ||
| or93a1 | XP_002665989.2 | None | |||
| Blue background indicates that the domain is not in the aligned region. | |||||