DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and or90b2

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_017211912.1 Gene:or90b2 / 100150771 ZFINID:ZDB-GENE-070806-24 Length:349 Species:Danio rerio


Alignment Length:260 Identity:54/260 - (20%)
Similarity:95/260 - (36%) Gaps:63/260 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 NGNSNTFDLVDDEQERAAVEFWLLVKMIAMAVVLGLMILVTIIGNVFVIAAIILERNLQNVANY- 127
            |....|:..||...|..|..|        ..|:|||  ::|.:..:||. .........|...| 
Zfish    41 NSTMFTYTNVDRYAEAFAKNF--------TTVLLGL--IITCVNGLFVF-TFFKSSIFYNDPRYI 94

  Fly   128 LVASLAVADLFVACLVMPLGAVYEISNGWILGPELCDIWTSCDVLCCTASILH------LVAIAA 186
            |...:.:.|:.:....:.|..   ::..|...|.     ..|..|...:|..|      |..:|.
Zfish    95 LYVHMVICDMLMVIFSVGLSV---MAYAWPNVPV-----PFCVTLLLISSTTHKNTPLTLAGMAI 151

  Fly   187 DRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLAPQF--------------------GWKD 230
            :||..:.. :.:|.:.|.||.:::|..:|...::.|||...                    .:..
Zfish   152 ERYIAICKPLHHNQICTVRRTYILISLIWSVGVLPSLADLILLSIVRPLAFYTSALCSTSNLYST 216

  Fly   231 PDYMKRIEEQHCMVSQDVGYQIFATCCTFYVPLLVILFLYWKIYIIARKRI--QRRAQKSFNVTL 293
            |.:    |||     ..:.:.|:.|     |..:::::.|.::.|.|||..  :..|:|:.|..|
Zfish   217 PYH----EEQ-----SKITHGIYTT-----VVWVILVYTYCRVLIAARKATADKSSAKKAQNTIL 267

  Fly   294  293
            Zfish   268  267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 39/210 (19%)
or90b2XP_017211912.1 7tm_4 61..>187 CDD:304433 29/144 (20%)
7tm_4 <146..336 CDD:304433 29/136 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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