DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and or137-5

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:XP_001923211.1 Gene:or137-5 / 100149850 ZFINID:ZDB-GENE-070806-26 Length:310 Species:Danio rerio


Alignment Length:290 Identity:53/290 - (18%)
Similarity:95/290 - (32%) Gaps:111/290 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NSNTFDLVDDEQERAAV--EFWLLVKMIAMAVVLGLMILVTIIGNVFVIAAIILERNLQNVANY- 127
            ||....:...::.|.|:  .|.:::..|.:..:.||.:......:||           .|...| 
Zfish     2 NSTVLQVNAQDRFRDALVRNFIVVIFGITINSINGLFVFTFFRSSVF-----------YNDPRYI 55

  Fly   128 LVASLAVADLFVACLVMPLGAVYEISNGWILGPELCDIWTS-----CDVLCCTA------SILHL 181
            |...|.:.|:.:..:.:.|..             :...|.:     |.||...|      |:|.|
Zfish    56 LYIHLVINDMLMVFVSVSLSV-------------MAYAWRNVPIPFCVVLLIIASKTHKNSVLTL 107

  Fly   182 VAIAADRYWTVTN-IDYNNLRTPRRVFLMIFCVWFAALIVSLA---------PQFGWKDPDYMKR 236
            ..::.:||..:.. :.::.:.|.||.:::|..:|...::..|:         |.|..||      
Zfish   108 AGMSVERYIAICKPLHHHQICTVRRTYILISLIWSVGVLPGLSDFILLSVIDPTFYTKD------ 166

  Fly   237 IEEQHCMVSQDVGYQIFATCCT----FYVPL-----------------LVILFLYWKIYIIARKR 280
                              |.||    :..|.                 |::::.|.::.|.||| 
Zfish   167 ------------------TICTASRLYNTPYHEELSKYMTGIYSSGVWLILIYTYCRVLITARK- 212

  Fly   281 IQRRAQKSFNVTLTETDCDSAVRELKKERS 310
                         ..||..||    ||.:|
Zfish   213 -------------ASTDKSSA----KKAQS 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 38/223 (17%)
or137-5XP_001923211.1 7tm_4 22..>147 CDD:304433 27/148 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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