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Protein Alignment 5-HT1B and or90a1
DIOPT Version :9
Sequence 1: | NP_001137708.2 |
Gene: | 5-HT1B / 37191 |
FlyBaseID: | FBgn0263116 |
Length: | 629 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001082920.1 |
Gene: | or90a1 / 100001167 |
ZFINID: | ZDB-GENE-070806-22 |
Length: | 315 |
Species: | Danio rerio |
Alignment Length: | 161 |
Identity: | 36/161 - (22%) |
Similarity: | 66/161 - (40%) |
Gaps: | 36/161 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 86 LLVKMIAMA------VVLGLMILVTIIGNVFVIAA-------------IILERNLQNVANYLVAS 131
||....||| |||...:|..|.|: |:|. |:....:.|.|..|..:
Zfish 10 LLRDTFAMAFMKNFIVVLVWFLLSYINGS--VVATFFRHQIFYEDPRYILFIHMVINDAVQLTVT 72
Fly 132 LAVADLFVACLVMPLGAVYEISNGWILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVT-NI 195
:| ||:...:: |.||.| :|..:....|....::.::|..:|.:||..:. .:
Zfish 73 IA---LFLVSYIL-----YTISVG------VCCFFILVAVFTTRSTPVNLAGMAIERYIAICYPL 123
Fly 196 DYNNLRTPRRVFLMIFCVWFAALIVSLAPQF 226
.:..:.|..|.:::|..:||.:::..:...|
Zfish 124 RHAQICTVHRAYVLIGVIWFVSVVPDITDLF 154
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
5-HT1B | NP_001137708.2 |
7tm_1 |
107..>288 |
CDD:278431 |
26/134 (19%) |
or90a1 | NP_001082920.1 |
7tm_4 |
<108..298 |
CDD:304433 |
10/47 (21%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24247 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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