DRSC/TRiP Functional Genomics Resources

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Protein Alignment 5-HT1B and or90a1

DIOPT Version :9

Sequence 1:NP_001137708.2 Gene:5-HT1B / 37191 FlyBaseID:FBgn0263116 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_001082920.1 Gene:or90a1 / 100001167 ZFINID:ZDB-GENE-070806-22 Length:315 Species:Danio rerio


Alignment Length:161 Identity:36/161 - (22%)
Similarity:66/161 - (40%) Gaps:36/161 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 LLVKMIAMA------VVLGLMILVTIIGNVFVIAA-------------IILERNLQNVANYLVAS 131
            ||....|||      |||...:|..|.|:  |:|.             |:....:.|.|..|..:
Zfish    10 LLRDTFAMAFMKNFIVVLVWFLLSYINGS--VVATFFRHQIFYEDPRYILFIHMVINDAVQLTVT 72

  Fly   132 LAVADLFVACLVMPLGAVYEISNGWILGPELCDIWTSCDVLCCTASILHLVAIAADRYWTVT-NI 195
            :|   ||:...::     |.||.|      :|..:....|....::.::|..:|.:||..:. .:
Zfish    73 IA---LFLVSYIL-----YTISVG------VCCFFILVAVFTTRSTPVNLAGMAIERYIAICYPL 123

  Fly   196 DYNNLRTPRRVFLMIFCVWFAALIVSLAPQF 226
            .:..:.|..|.:::|..:||.:::..:...|
Zfish   124 RHAQICTVHRAYVLIGVIWFVSVVPDITDLF 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
5-HT1BNP_001137708.2 7tm_1 107..>288 CDD:278431 26/134 (19%)
or90a1NP_001082920.1 7tm_4 <108..298 CDD:304433 10/47 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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