DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tn and TRIM41

DIOPT Version :10

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_291027.3 Gene:TRIM41 / 90933 HGNCID:19013 Length:630 Species:Homo sapiens


Alignment Length:625 Identity:120/625 - (19%)
Similarity:200/625 - (32%) Gaps:203/625 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   524 TSSGGGDTASDQRVAALKNRGGEESDGSSNQAA---------SPVRNSAASTTRAEVSVNEANTE 579
            |...||:...|:...   :|..||.||...:..         :|:|:........|    |...|
Human    45 TQLWGGEDEEDRDEL---DREEEEEDGEEEEVEAVGAGAGWDTPMRDEDYEGDMEE----EVEEE 102

  Fly   580 EEGV-----ASESSDSEEDEEVEDEDEEEEVD----------------EEEEQVEESVEEEE--- 620
            ||||     .|.||....|...|:|||||::|                |:||:|.|.||||:   
Human   103 EEGVFWTSGMSRSSWDNMDYVWEEEDEEEDLDYYLGDMEEEDLRGEDEEDEEEVLEEVEEEDLDP 167

  Fly   621 --------APRELLNLPE-----------------------EALQPT---SSEVTEEEESSSEYE 651
                    |||.....|:                       ..:.||   .|.|| ::....:::
Human   168 VTPLPPPPAPRRCFTCPQCRKSFPRRSFRPNLQLANMVQVIRQMHPTPGRGSRVT-DQGICPKHQ 231

  Fly   652 EVTATESEEEQEEVEGRVIEIESQDLPVINVLPPENDIAHKVEESPVDHISN-QELMEETDKSTD 715
            |......|.::|.:  .|:..||:.....:|:|.| ::..:.:.....|:.. ::.:|...|.  
Human   232 EALKLFCEVDEEAI--CVVCRESRSHKQHSVVPLE-EVVQEYKAKLQGHVEPLRKHLEAVQKM-- 291

  Fly   716 ESPEEEEEEEYTEEEIESKPPVSAQVAAVKKTQRSGSSDSSASTESSASSAAAAAVAATSTSATA 780
               :.:||...||.:.:.|..::|..:...:..|. .::..|..|........|.:.....:|:.
Human   292 ---KAKEERRVTELKSQMKSELAAVASEFGRLTRF-LAEEQAGLERRLREMHEAQLGRAGAAASR 352

  Fly   781 AAPATSSSNSTSQNAKAPSSSRYSTARDTTAVPEKKPFVSRFLPQHSTASTTNGSADKKKAESSS 845
            .|                               |:...:||.|.:....|...|....:..:.:.
Human   353 LA-------------------------------EQAAQLSRLLAEAQERSQQGGLRLLQDIKETF 386

  Fly   846 SSEEETSSE-----SESESEPET-----------KAKSSATSSTTNTKSTPNSAASSTTAASSST 894
            :..||...:     |....:|.:           .::....::..:....|::|..:...:.   
Human   387 NRCEEVQLQPPEVWSPDPCQPHSHDFLTDAIVRKMSRMFCQAARVDLTLDPDTAHPALMLSP--- 448

  Fly   895 TSGSYRDRLEARRASRDDSSSTAAGRSS--YATPSSSGYGSG----SGTTGGRTR-AVPAPHHTS 952
                  ||...|.|.|....:....|.|  .....:.|:.||    ....|||.. ||.|...::
Human   449 ------DRRGVRLAERRQEVADHPKRFSADCCVLGAQGFRSGRHYWEVEVGGRRGWAVGAAREST 507

  Fly   953 ESEDRYGSGTGSSYTSRFLNKSKSSAIVTQPSLSTPTASFDEDATGTGDDSDSRY---------- 1007
            ..:::.|.| |||                               .|:||.|.||:          
Human   508 HHKEKVGPG-GSS-------------------------------VGSGDASSSRHHHRRRRLHLP 540

  Fly  1008 ------------GTGRSRYLAMKE-RRTRLARSRSSHQFG 1034
                        ||...||.|... .:|.|:.|....:||
Human   541 QQPLLQREVWCVGTNGKRYQAQSSTEQTLLSPSEKPRRFG 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187
CC_brat-like 124..232 CDD:475168
NHL_TRIM71_like 1234..1517 CDD:271324
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
TRIM41NP_291027.3 RING_Ubox 15..>48 CDD:473075 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..86 6/37 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 143..176 9/32 (28%)
RING_Ubox <182..211 CDD:473075 1/28 (4%)
Bbox2_TRIM7-like 225..268 CDD:380820 9/45 (20%)
SMC_N <249..>395 CDD:481474 28/183 (15%)
SPRY_PRY_TRIM41 432..630 CDD:240499 39/190 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 503..538 11/66 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.