DRSC/TRiP Functional Genomics Resources

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Protein Alignment tn and XB5759442

DIOPT Version :10

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_001039066.1 Gene:XB5759442 / 733855 XenbaseID:XB-GENE-5759443 Length:543 Species:Xenopus tropicalis


Alignment Length:498 Identity:103/498 - (20%)
Similarity:160/498 - (32%) Gaps:161/498 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTCCVCLDRYRIPKLLPCQHSFCMEPCMEGLVDYVRRQ--VKCPECRAEHRIPYNGVQAFPTNVT 70
            |:|.:|...|..|..|||.|:|| ..|:.|::......  ..|||||||    |....|.|.|..
 Frog    10 LSCSICTSIYTDPVSLPCGHNFC-RGCIGGVLGTQEGSGAYSCPECRAE----YQECPALPRNRA 69

  Fly    71 L----QRFLELHIEITGE-----------------------------------------LPDPTS 90
            |    :||.....| .||                                         |.:||:
 Frog    70 LGNIAERFRPTETE-PGETGIFCTYCLLSPVPAAKSCLLCEASLCDTHLRGHCQSAEHVLTEPTA 133

  Fly    91 GQIMERCGVCSE--KAYLSHCAHCEKKICEDC------KSAHMDILRREITRFNSQIRRSLHRLQ 147
            ..:..:|.|.:|  |.:....:.|   ||..|      :...:::|.....:...::|:.|.:|.
 Frog   134 SFMGRKCSVHNELLKYFCCEDSAC---ICVSCCLAGEHRGHRVELLSEASEKKKEKLRKVLEKLS 195

  Fly   148 DSLAIIEKNTMSLQTN-------AISVTEEIDEIYQRITKAIKDRSDQLKGEIDRY-------LA 198
            ......|:....||..       |...||.:..:::.|.:.::....:|..:|.|.       |.
 Frog   196 PEREETERGAQRLQERRREVAEVAAGETERVTALFRGIREELEALEKRLLSDISRQKEELSLTLT 260

  Fly   199 VELRNLTTLKENLDLEITNITSNCDTVDKYMNETVEWDD-------CELMDTKEIFLKTVEFLRH 256
            ..::.|...|:.|..:|.:|...|:..|.......:|:.       .|..||        |....
 Frog   261 ELIQQLEIKKDELSRKIHHIEELCNMADPLTVLQEQWESHGAAFCGAEGADT--------EGRER 317

  Fly   257 FEYENNDYSRR------VRFLVSIDPNQLVMNLAT-------------FG--------DLNIA-P 293
            .:.|..|..||      |..:..:|..::...|.|             :|        |.|.| .
 Frog   318 EDTEGGDRKRRKINHIKVPAVGDLDVGRISETLLTGLAGIVTGVEGRIYGQGDTELVLDRNTAGN 382

  Fly   294 HSTPSGGSVSSSHLAPPSALQPGLMRSKSDHRLATQFRQQEERSGYNDEPVLGGRKF-GERPQRS 357
            |.:.||...|:|:             |.:|.|..    |..||..|..: .|..|.| ..|....
 Frog   383 HVSVSGDGKSASY-------------SHTDQRRP----QTPERFQYYPQ-TLSTRSFPSGRHYWE 429

  Fly   358 ATQANNDRYG---------RSGGD------------YDYENDY 379
            ...:.:..:|         |.||.            |.:.|:|
 Frog   430 VEVSESGGWGVGAAYPSIERGGGQSLIGNNNKSWCLYKWNNNY 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187 19/48 (40%)
CC_brat-like 124..232 CDD:475168 22/121 (18%)
NHL_TRIM71_like 1234..1517 CDD:271324
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
XB5759442NP_001039066.1 RING-HC_TRIM25_C-IV 5..76 CDD:438259 25/70 (36%)
Bbox_SF 91..131 CDD:469587 1/39 (3%)
Bbox2_TRIM16-like 138..184 CDD:380827 9/48 (19%)
BBC 183..310 CDD:128778 23/126 (18%)
SPRY_PRY_C-I_2 373..542 CDD:293949 26/118 (22%)
Blue background indicates that the domain is not in the aligned region.

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