DRSC/TRiP Functional Genomics Resources

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Protein Alignment tn and TRIM64C

DIOPT Version :10

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_001193560.1 Gene:TRIM64C / 646754 HGNCID:37148 Length:450 Species:Homo sapiens


Alignment Length:349 Identity:79/349 - (22%)
Similarity:131/349 - (37%) Gaps:86/349 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 FEQLLTCCVCLDRYRIPKLLPCQHSFCMEPCM-----EGLVDYVRRQVKCPECRAEHRIPYNGVQ 63
            |:..|.||:|::.:..|....|.|||| .||:     ||     |..::||.||.....|     
Human     9 FQNELICCICVNYFIDPVTTDCVHSFC-RPCLCLCSEEG-----RAPMRCPLCRKISEKP----- 62

  Fly    64 AFPTNVTLQRFLE------------------LHIEITGELPDPTSGQIMERCGVCSEKAYLSHCA 110
            .|.|||.|::...                  || |.|.||......:::  ||.|||..  .|.|
Human    63 NFNTNVALKKLASLARQTRPQNINSSDNICVLH-EETKELFCEADKRLL--CGPCSESP--EHMA 122

  Fly   111 HCEKKI---CEDCK----SAHMDILRREITRFNSQIRRSLHR-------------LQDSLAIIEK 155
            |....|   .|:|:    ...||.|    .:.|.:.:.:|::             |:..:..|:.
Human   123 HSHSPIGWAAEECRVQKLIKEMDYL----WKINQETQNNLNQETSKFCSLVDYVSLRKVIITIQY 183

  Fly   156 NTMSL------QTNAISVTEEIDEIYQRITKAIKDRSDQLKGEIDRYLAVELRNLTTLKENLDLE 214
            ..|.:      |.:..::..|..|::|::..:....:..|:|..|.|     |.|.......|:|
Human   184 QKMHIFLDEEEQRHLQALEREAKELFQQLQDSQVRMTQHLEGMKDMY-----RELWETYHMPDVE 243

  Fly   215 ----ITNITSNCDTVDKYMNETVEWDDCELMDTKEIFLKTVEFLRHFEYENNDYSRRVRFLVSID 275
                :.||::..|.......:.|   :.||  |.......::.|.:|..:|...:......:|:.
Human   244 LLQDVGNISARTDLAQMPKPQPV---NPEL--TSWCITGVLDMLNNFRVDNALSTEMTPCYISLS 303

  Fly   276 PNQLVMNLATFGDLNIAPHSTPSG 299
            .:   :....|||.:.:....|.|
Human   304 ED---VRRVIFGDDHRSAPMDPQG 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187 20/55 (36%)
CC_brat-like 124..232 CDD:475168 23/130 (18%)
NHL_TRIM71_like 1234..1517 CDD:271324
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
TRIM64CNP_001193560.1 RING_Ubox 9..67 CDD:473075 22/68 (32%)
Bbox2_TRIM43-like 86..136 CDD:380841 16/54 (30%)
SPRY 285..446 CDD:470632 8/43 (19%)
Blue background indicates that the domain is not in the aligned region.

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