DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tn and wech

DIOPT Version :9

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_001137614.1 Gene:wech / 44653 FlyBaseID:FBgn0259745 Length:832 Species:Drosophila melanogaster


Alignment Length:876 Identity:214/876 - (24%)
Similarity:327/876 - (37%) Gaps:195/876 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   753 SDSSASTESSASSAAAAAVAATSTSATAAAPATSSSNSTSQNAKAPSSSRYS-TARDTTA----- 811
            |::|...:.::|:|.:|...|.|::|..:...:.|||:::.:.:..:....| .|.|...     
  Fly     6 SNNSVPQQMASSNAPSANNVAHSSTANGSGGGSVSSNASNSSERLLAGILESFPAWDLNVGLLPN 70

  Fly   812 VPEKKP-----FVSRFLPQHSTASTTNGSADKKKAESSSSSEEETSSESESESE-----PETKA- 865
            |.:..|     |::.||    ....|:|........|.:.|..:.|.||.:.|.     .|..| 
  Fly    71 VGQSSPPRADFFINNFL----GGLDTHGDFSIGPIGSGARSNPKMSPESSNNSSISCGWCEVSAS 131

  Fly   866 ------------------KSSATSSTTNTKSTPNSAASSTTAASS----STTSGS---------- 898
                              ::|..||..:..|.|....:|.|..||    :..||:          
  Fly   132 IRCLECNEFMCNDCLREHRNSPLSSNHSIVSLPTPIGASPTGGSSVNAQTPPSGNFICDIHNEML 196

  Fly   899 -----YRDRLEARRASRDDSSSTAAGRSSYATPSSSGYGSGSGTTGG------RTRAVPA----- 947
                 |..:|..:..:..:..     ..|||:..|...||.....|.      .||.:.:     
  Fly   197 RYVCDYCRKLVCQCCTLHEHK-----EHSYASIQSFMVGSKEKLEGAIESSQVGTRCIKSSIDKA 256

  Fly   948 -------PHHTSE---------------SEDRYGSGTGSSYTSRFLNKSKSSAIVTQPSLSTPTA 990
                   ..:.||               .|||      ..:...|:.|.:...:..   |....|
  Fly   257 LAFIRLIERNCSELSDNIRKAFRQFIIAIEDR------ERFLLDFVEKLRQRRLAI---LHDQMA 312

  Fly   991 SFDEDATGTGDDSD--SRYGTGRSRY----LAMKERRTRLARSRSSHQFGNDDEDLDEPVSPTTV 1049
            .......|..:.||  |:........    :|||....:    |...||....:||.........
  Fly   313 GLKSALAGLSETSDMLSKVADNACNMDQIEIAMKLTNGQ----RQMEQFAGIYKDLQPKQEVFAF 373

  Fly  1050 SPSAYLASRCAYSGYGSSDLSRSRSSHALKSRDNSPITDRGAGSSRSSGLGGSSTTDSKDGEALS 1114
            :|..|...:         |: |::....|....|.||.      |.|:|:..|.::         
  Fly   374 APPDYSLLQ---------DI-RNQGGVILVDDKNLPIV------SSSNGIVPSVSS--------- 413

  Fly  1115 SWARYLKNKYGNKSSKDSAGSSGSARDTHAGSSTSS--SAAASSSHAHGYGSGTSGSSGRSTASD 1177
                      .|..:..|.|..|.......|...|:  ..|...:..:...|..|.|..|....|
  Fly   414 ----------VNAVAAASVGVVGGVAGVVGGVGVSNGLDLAFGMNMPNNPLSVASSSVRRPLLRD 468

  Fly  1178 VSRRLSLGLPLRQ---------ANELASSDDDGSKNGLGSPTSPTVAAAVAAAGITGAAGTIPKQ 1233
            .|.|:.  .|:.|         ::.::|:..|...|||.|......:|......|.|....    
  Fly   469 NSFRIP--SPIMQPRGGSACGMSSGMSSAALDWELNGLRSSPGLHFSAPRTTQAIPGCMDL---- 527

  Fly  1234 VYLRKRQQL-FQLGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGN 1297
            |.:|....| ......|.|.|..:.|.||.|.....::|:|..|:|||||:.:|....:||..|.
  Fly   528 VKVRNSNALSLSFATEGHEDGQVSRPWGLCVDKMGHVLVSDRRNNRVQVFNPDGSLKFKFGRKGV 592

  Fly  1298 GEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGF 1362
            |.||||..||:.|:...:.|:.|:.|||:|:....|.||..|||.|...|:|.|||.|..::...
  Fly   593 GNGEFDLPAGICVDVDNRIIVVDKDNHRVQIFTASGVFLLKFGSYGKEYGQFQYPWDVAVNSRRQ 657

  Fly  1363 IYVCDKENHRVQVFQSDGSFVGK--FGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDV 1425
            |.|.|..|||:|.|.|:|.|:.:  |.:.|:.:| :..|..:..:.|..:||||.:||.:.:.|.
  Fly   658 IVVTDSRNHRIQQFDSEGRFIRQIVFDNHGQTKG-IASPRGVCYTPTGNIIVSDFDNHCLYLIDP 721

  Fly  1426 N-GKVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDSE 1489
            : ..:||..|.|||...:|..|.|:..||:|.|.||||.|.||.:||.:..|:     |   |.|
  Fly   722 DINDILSVKGHEGSGFHEFNRPSGLCCDDEGRIIVADSKNQRILVFNQNLDFM-----W---DIE 778

  Fly  1490 FK---------GLE------GVAIMSNGNIL 1505
            .:         .|:      .||||.:|.|:
  Fly   779 VRPSINPLMPPTLDEKDRTCDVAIMPDGRIV 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING 9..54 CDD:238093
zf-B_box 94..>122 CDD:279037
iSH2_PI3K_IA_R 131..231 CDD:304922
NHL_TRIM71_like 1234..1517 CDD:271324 105/291 (36%)
YncE 1253..>1517 CDD:225926 100/271 (37%)
NHL repeat 1258..1297 CDD:271324 15/38 (39%)
WD40 repeat 1261..1304 CDD:293791 18/42 (43%)
NHL repeat 1305..1344 CDD:271324 15/38 (39%)
WD40 repeat 1345..1377 CDD:293791 13/31 (42%)
NHL repeat 1352..1388 CDD:271324 15/37 (41%)
NHL repeat 1396..1436 CDD:271324 12/40 (30%)
WD40 repeat 1402..1439 CDD:293791 13/37 (35%)
NHL repeat 1445..1475 CDD:271324 15/29 (52%)
WD40 repeat 1446..1485 CDD:293791 17/38 (45%)
NHL repeat 1491..1517 CDD:271324 7/30 (23%)
wechNP_001137614.1 BBOX 187..224 CDD:237988 5/41 (12%)
iSH2_PI3K_IA_R 232..343 CDD:304922 16/119 (13%)
YncE <527..>740 CDD:225926 78/217 (36%)
NHL_TRIM71_like 528..810 CDD:271324 105/291 (36%)
NHL repeat 553..592 CDD:271324 15/38 (39%)
NHL repeat 600..639 CDD:271324 15/38 (39%)
WD40 repeat 603..640 CDD:293791 14/36 (39%)
WD40 repeat 647..684 CDD:293791 14/36 (39%)
NHL repeat 647..683 CDD:271324 14/35 (40%)
WD40 repeat 692..736 CDD:293791 14/43 (33%)
NHL repeat 692..733 CDD:271324 12/40 (30%)
NHL repeat 742..772 CDD:271324 15/29 (52%)
WD40 repeat 743..767 CDD:293791 13/23 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447039
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BA7J
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D133242at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105050
Panther 1 1.100 - - P PTHR24104
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.750

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