DRSC/TRiP Functional Genomics Resources

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Protein Alignment tn and NHLRC3

DIOPT Version :10

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_001012772.1 Gene:NHLRC3 / 387921 HGNCID:33751 Length:347 Species:Homo sapiens


Alignment Length:358 Identity:90/358 - (25%)
Similarity:140/358 - (39%) Gaps:80/358 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1172 RSTASDVSRRLSLGLPLRQANELASSDDDGSKNGLGSPTSPT----VAAAVAAAGITGAAGTIPK 1232
            |...|.|.|..:..:..|....|...|       :|.|..|.    ....||...:.|       
Human    23 RFCGSPVLRNFTFAVSWRTEKILYRLD-------VGWPKHPEYFTGTTFCVAVDSLNG------- 73

  Fly  1233 QVYLRKRQQLFQLGGRG---------SEPGSF--TW------PRGLAVGP---DNSIVVADSSN- 1276
                     |..:|.||         :|.|.|  .|      |.|:....   :.|:.:.|..: 
Human    74 ---------LVYIGQRGDNIPKILVFTEDGYFLRAWNYTVDTPHGIFAASTLYEQSVWITDVGSG 129

  Fly  1277 ---HRVQVFDSNGIFVKEFGEYGNGEG------EFDCLAGVAVNRIGQYIIAD---RYNHRIQVL 1329
               |.|:.:.|.|..|:..|..|. :|      :||..|.:.|...|...|.|   ..|:|:..|
Human   130 FFGHTVKKYSSFGDLVQVLGTPGK-KGTSLNPLQFDNPAELYVEDTGDIYIVDGDGGLNNRLIKL 193

  Fly  1330 DPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDKENHRVQVFQSD-GSFVGKFGSCGRGE 1393
            ......|...|..||...|||.|..||.|:.|.::|.|:.|.|:|||..| |.::|.:.:|...|
Human   194 SQDFMILWLHGENGTGPAKFNIPHSVTLDSAGRVWVADRGNKRIQVFDKDTGEWLGAWNNCFTEE 258

  Fly  1394 GQLEHPHYIAVSNTNR-VIVSDSNNHRIQIFDV-------NGKVLSTVGGEGSDDGQFKFPRGVA 1450
            |    |..:..:...: :||:..|..|:.:...       ...|:||:  :.:|.   ..|..:.
Human   259 G----PSSVRFTPDGKYLIVAQLNLSRLSVVAAPPVGSIGECSVISTI--QLADQ---VLPHLLE 314

  Fly  1451 VDDQ-GYIFVADSGNNRIQIFNPDGSFLKTFGS 1482
            ||.: |.::||:.|..::|.:.|..|::.:|||
Human   315 VDRKTGAVYVAEIGAKQVQKYVPLNSYVPSFGS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187
CC_brat-like 124..232 CDD:475168
NHL_TRIM71_like 1234..1517 CDD:271324 77/292 (26%)
NHL repeat 1258..1297 CDD:271324 10/45 (22%)
WD40 repeat 1261..1304 CDD:293791 11/55 (20%)
NHL repeat 1305..1344 CDD:271324 10/41 (24%)
WD40 repeat 1345..1377 CDD:293791 14/31 (45%)
NHL repeat 1352..1388 CDD:271324 15/36 (42%)
NHL repeat 1396..1436 CDD:271324 8/47 (17%)
WD40 repeat 1402..1439 CDD:293791 7/44 (16%)
NHL repeat 1445..1475 CDD:271324 9/30 (30%)
WD40 repeat 1446..1485 CDD:293791 13/38 (34%)
NHL repeat 1491..1517 CDD:271324
NHLRC3NP_001012772.1 NHL 1 47..93 11/68 (16%)
NHL 66..336 CDD:302697 75/295 (25%)
NHL repeat 107..153 CDD:271320 10/45 (22%)
NHL 2 150..196 12/46 (26%)
NHL repeat 166..205 CDD:271320 9/38 (24%)
NHL 3 200..243 19/42 (45%)
NHL repeat 213..250 CDD:271320 16/36 (44%)
NHL repeat 258..295 CDD:271320 7/40 (18%)
NHL 4 294..338 12/48 (25%)
NHL repeat 308..335 CDD:271320 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.

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