DRSC/TRiP Functional Genomics Resources

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Protein Alignment tn and Rnf225

DIOPT Version :10

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_084085.1 Gene:Rnf225 / 381845 MGIID:1924198 Length:332 Species:Mus musculus


Alignment Length:98 Identity:29/98 - (29%)
Similarity:41/98 - (41%) Gaps:24/98 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTCCVCLDR----YRIPKLLPCQHSFCMEPCMEGLV-------DYVRRQVKCPECRAEHRI-PYN 60
            :.|.:|:..    :::||.|.|.|.||:| |:..|.       |    .|.||.|||..|: |..
Mouse    61 MECLICVSPFDGIFKLPKRLDCGHVFCLE-CLARLSLATAGGGD----AVACPMCRAPTRLAPRR 120

  Fly    61 GVQAFPTNVTLQRFLELHIEITGELPDPTSGQI 93
            |:.|.||...|       :......|.|..|.:
Mouse   121 GLPALPTQPGL-------LPRDARAPLPRQGSV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187 19/57 (33%)
CC_brat-like 124..232 CDD:475168
NHL_TRIM71_like 1234..1517 CDD:271324
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
Rnf225NP_084085.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
RING-HC_RNF183-like 62..117 CDD:438218 20/59 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..187 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..332
Blue background indicates that the domain is not in the aligned region.

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