| Sequence 1: | NP_001137707.1 | Gene: | tn / 37190 | FlyBaseID: | FBgn0265356 | Length: | 1517 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_954706.1 | Gene: | Nhlrc1 / 364682 | RGDID: | 735081 | Length: | 396 | Species: | Rattus norvegicus |
| Alignment Length: | 340 | Identity: | 84/340 - (24%) |
|---|---|---|---|
| Similarity: | 130/340 - (38%) | Gaps: | 69/340 - (20%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1206 LGSPTSPTVAAAVAAAGITGAAGTIPKQVYLRKRQQLFQLGGRGSEPGSFTWPRGLAVGPDNS-I 1269
Fly 1270 VVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGR 1334
Fly 1335 FLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHP 1399
Fly 1400 HYIAVS-NTNRVIV---------SDSNNHRIQIFDVNGKVLSTVGGEGSDDGQFKFP-----RGV 1449
Fly 1450 AVDDQGYIFVAD-SGNNRIQIFNPDGSFLKTFGSWGSGDSEFKGLE-----------GVAIMSNG 1502
Fly 1503 NILVCDRENHRVQVF 1517 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| tn | NP_001137707.1 | RING | 9..54 | CDD:238093 | |
| zf-B_box | 94..>122 | CDD:279037 | |||
| iSH2_PI3K_IA_R | 131..231 | CDD:304922 | |||
| NHL_TRIM71_like | 1234..1517 | CDD:271324 | 73/310 (24%) | ||
| YncE | 1253..>1517 | CDD:225926 | 71/291 (24%) | ||
| NHL repeat | 1258..1297 | CDD:271324 | 16/39 (41%) | ||
| WD40 repeat | 1261..1304 | CDD:293791 | 15/43 (35%) | ||
| NHL repeat | 1305..1344 | CDD:271324 | 9/38 (24%) | ||
| WD40 repeat | 1345..1377 | CDD:293791 | 8/31 (26%) | ||
| NHL repeat | 1352..1388 | CDD:271324 | 9/35 (26%) | ||
| NHL repeat | 1396..1436 | CDD:271324 | 13/49 (27%) | ||
| WD40 repeat | 1402..1439 | CDD:293791 | 12/46 (26%) | ||
| NHL repeat | 1445..1475 | CDD:271324 | 12/35 (34%) | ||
| WD40 repeat | 1446..1485 | CDD:293791 | 11/44 (25%) | ||
| NHL repeat | 1491..1517 | CDD:271324 | 5/36 (14%) | ||
| Nhlrc1 | NP_954706.1 | zf-RING_5 | 22..70 | CDD:291308 | |
| NHL 1 | 110..154 | 15/59 (25%) | |||
| NHL_TRIM32_like | 115..389 | CDD:271331 | 75/303 (25%) | ||
| NHL repeat | 126..166 | CDD:271331 | 16/39 (41%) | ||
| NHL 2 | 158..201 | 10/42 (24%) | |||
| NHL repeat | 174..213 | CDD:271331 | 9/44 (20%) | ||
| NHL 3 | 202..242 | 11/45 (24%) | |||
| NHL repeat | 215..256 | CDD:271331 | 10/41 (24%) | ||
| NHL 4 | 245..298 | 14/52 (27%) | |||
| NHL repeat | 258..311 | CDD:271331 | 14/52 (27%) | ||
| NHL 5 | 299..347 | 13/50 (26%) | |||
| NHL repeat | 319..351 | CDD:271331 | 11/46 (24%) | ||
| NHL 6 | 348..391 | 9/56 (16%) | |||
| NHL repeat | 362..388 | CDD:271331 | 4/25 (16%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR24104 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.010 | |||||