DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tn and Trim45

DIOPT Version :9

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_001159425.1 Gene:Trim45 / 229644 MGIID:1918187 Length:757 Species:Mus musculus


Alignment Length:733 Identity:131/733 - (17%)
Similarity:232/733 - (31%) Gaps:268/733 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CCVCLDRYRIPKLLPCQHSFCMEPCMEGL-----VDY---------------------VRRQ--V 46
            |..||..:::|:||||.|:.| ..|:|.|     ||.                     ::.|  :
Mouse    29 CPTCLRLFKVPRLLPCLHTVC-TTCLEKLDPFSVVDIRGGDSDTSSEGSVFQDPELCSLQPQIGI 92

  Fly    47 KCPECRAEHRIPYNGVQAFPTNVTLQRFLELHIEITGELPDPTSG-------------QIMERCG 98
            .||.|.|:..:|..||:|...:         |:.:...|.:...|             ::.:||.
Mouse    93 LCPVCDAQVDLPLGGVKALTVD---------HLAMNDVLLENLRGEGQGLVCDLCSDREVEKRCQ 148

  Fly    99 VCSEKAYLSH----------------------------------------------CAHCEKKIC 117
            .|  ||.|.|                                              |..|::.:|
Mouse   149 TC--KANLCHFCCQAHRRQKKTTYHTMVDLKDLKGYSQVGKPILCPSHPAEELRLFCELCDRPVC 211

  Fly   118 EDC-----KSAHMDILRREITRFNSQIRRSL-------HRLQDSLAIIEKNTMSLQTNAISVTEE 170
            .||     :....|.....|.:....:|..|       ..|:|:||.|:....:||....:|..:
Mouse   212 RDCVVGEHREHPYDFTSNVIHKHGDSVRELLRDTQPHVEALEDALAQIKSVNNALQERVEAVAAD 276

  Fly   171 IDEIYQRITKAIKDRSDQLKGEID-----RYLAVELRNLTTLKENLDLEITNITSNCDTVDKYMN 230
            :....:...|||::..|:|..::|     |..|::|:     |..|:..:.::.:..:..:..: 
Mouse   277 VRTFSEGYIKAIEEHRDKLLQQLDDIRIQRETALQLQ-----KAQLEQLLADMRTGVEFTEHLL- 335

  Fly   231 ETVEWDDCELMDTKEIFLKTVEFLRHFEYENNDYSRR--VRFLVSIDPNQLVMNLATFGDLNIAP 293
              ....|.|::.||.:.::.:..|...|     ||.|  |...:...|.:               
Mouse   336 --TSGSDLEILITKGVVVERLRKLNKVE-----YSARPGVNHKICFSPQE--------------- 378

  Fly   294 HSTPSG--------GSVSSSHLAPPSALQPGLMRSKSDHRLATQFRQQEERSGYNDEPVLGGRKF 350
               .:|        |::::..:.|...    :::.:..||..                       
Mouse   379 ---KAGQCQGYEVYGAINTQEVDPAQC----VLQGEDLHRAR----------------------- 413

  Fly   351 GERPQRSATQANNDRYGRS---GGDYDYEN--DYDNEGSSGRAGKSSRFRSRFVRSHQNDDSDSE 410
             |:...|.|....|..|:|   |||..:..  ..|.:.|.             :|:...|:.|..
Mouse   414 -EKQTASFTLFCKDASGQSMGRGGDNVHVEVVPKDKKDSP-------------IRTVVQDNKDGS 464

  Fly   411 QQQQQRQQELKERKDRVLDSEDVSRGQLSGIIRLSDCSR---VVQRLADIGKEKKEK-------- 464
            .:.....:|                   .||..:..|.|   |.....::...:|.:        
Mouse   465 YRVSYTPKE-------------------PGIYTVWVCIREQHVQGSPFNVTVRRKHRPHPGVFHC 510

  Fly   465 ----KSDAAAAAQAAVQAAIQAQKAAMQRQQQKNQQNAADEEELARQKRKNAGSSSTGGAATSTS 525
                .|....||:.|....:.|::   .:|||            ||.:...|....|...||.|.
Mouse   511 CTFCSSGGQKAARCACGGTMPARR---PKQQQ------------ARVRPFAASQVDTLAVATDTK 560

  Fly   526 S-----GGGDTASDQRVAALKNRGGEESDGSSNQAASPVRNSAA----STTRAEVSVNEANTEEE 581
            :     .|....|..|..:.::|.|....|   ....|.|:.|:    .....|.|:..|....:
Mouse   561 ATRAVHTGLAVGSSLRSPSARSRVGRAPRG---VCLGPWRSDASWGQVGPGNPEASITSAMQRTQ 622

  Fly   582 GVASESSDSEEDEEVEDE 599
            .::|    |:|.:.::||
Mouse   623 SLSS----SKETDRIKDE 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING 9..54 CDD:238093 19/71 (27%)
zf-B_box 94..>122 CDD:279037 12/78 (15%)
iSH2_PI3K_IA_R 131..231 CDD:304922 22/111 (20%)
NHL_TRIM71_like 1234..1517 CDD:271324
YncE 1253..>1517 CDD:225926
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
Trim45NP_001159425.1 BBOX 189..226 CDD:237988 5/36 (14%)
iSH2_PI3K_IA_R 237..357 CDD:304922 25/127 (20%)
Filamin 394..497 23/162 (14%)
Filamin 397..493 CDD:279024 23/155 (15%)
IG_FLMN 399..497 CDD:214720 23/157 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489543at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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