DRSC/TRiP Functional Genomics Resources

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Protein Alignment tn and C45G7.4

DIOPT Version :9

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:NP_500203.1 Gene:C45G7.4 / 177032 WormBaseID:WBGene00016671 Length:603 Species:Caenorhabditis elegans


Alignment Length:627 Identity:126/627 - (20%)
Similarity:215/627 - (34%) Gaps:230/627 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLV----DYVRRQVKCPECRAEHRIPYNG 61
            :.|:||.||.:.:    |.||||||.|:|| |.|:..|.    .|:...:|||.||.|  ...|.
 Worm    19 DSLITCEVCFEVFNHENRPPKLLPCGHNFC-ESCIFSLCLHQEYYLLDSIKCPTCRRE--FTTNT 80

  Fly    62 VQAFPTNVTLQRFLE------------LHI-EITGELPDP------------TSGQIMERCGVCS 101
            .:..|||..|.:.||            :.: |:...||.|            ||.|..::....:
 Worm    81 ARQAPTNYDLCKILENLFRRKEQNVTVIEVPELVHNLPPPMAEVSSSATKIVTSQQQQQQQPAVA 145

  Fly   102 EKAYLSH-------------------CAHCEKKI-----------CEDCKSAHM----------- 125
            .|....|                   ||.|::||           |.||.|...           
 Worm   146 TKMPRHHVSKKMKALAKRTEESKHFRCADCQRKISQKNLFRVSRYCVDCTSTSRMTIVCLECCVN 210

  Fly   126 -----DILRREITRFN-----SQIRRSLHRLQDSLAIIEKNTMSLQTNAISV------------- 167
                 |:|..:....|     |.:|:..||:.||....::....::|:.:.|             
 Worm   211 HHNGHDLLTEDSLHHNQLKTLSDLRKLRHRILDSSDEFDRRADEIRTSGMDVCGGLSAEKHNLLT 275

  Fly   168 --TEEIDEIYQRITKA----------IKD-------RSDQLKGEIDRYLA------------VEL 201
              ...||::.:||..|          |:|       |.::|..::::.|.            :|.
 Worm   276 YTLASIDDVMRRIEMAPILFPPVLRTIRDEQSHNFSRLEKLSAQLEKSLVSRKNTKPTSLTFIEN 340

  Fly   202 RNLTTLKENLDLEITNITSNCDTV------------DKYMNETVEWDDCELMDTKEIFLKTVEFL 254
            .|.||. :.|...:.|.:.|..|:            |...:|::. ....||....:.|: :|| 
 Worm   341 MNDTTY-QGLQRSVQNQSLNKSTLSIRQSRVSLRTDDSLFHESIS-SLTRLMHQHPMCLQ-LEF- 401

  Fly   255 RHFEYENND-YSRRVRFLVSIDPNQLVMNLATFGDLNIAPHSTPSGGSVSSSHLAPPSALQPGLM 318
            .|....:.| .::|         .|.:|:.|         |:|.|...:..:.::........|:
 Worm   402 HHSTVSSKDTVTQR---------KQKIMSCA---------HATTSMLDMDLTQVSMVPIFADVLL 448

  Fly   319 R--------SKSDHRLATQFRQ----QEERSGYNDEPVLGGRKF-GERPQRSATQANNDRYGRSG 370
            .        ||:......::|:    ::.:..|.:...:..:.| ...|:|              
 Worm   449 NCFYQLNRLSKNKFVGDKKYRRCDIWKQVQCSYTELFGITAKHFPSHHPER-------------- 499

  Fly   371 GDYDYEND-------YDNEGSSGRAG----KSSRFRSRFVRSHQNDDSDSEQQQQQRQQELKERK 424
              .|..:|       |.:....|...    :::|.|:       :|.|...:.:|||.:|..|..
 Worm   500 --VDILDDLAYLCHLYSDVADQGTVTICLIEAARARA-------SDSSGLTEIEQQRSEERLELI 555

  Fly   425 DRVLDSEDVSRGQLSGIIRLSDCSRVVQRLADIGKEKKEKKS 466
            |.                .|::|.| :|:|.::.|..|.||:
 Worm   556 DE----------------HLTECRR-LQKLLELRKTSKTKKN 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING 9..54 CDD:238093 23/52 (44%)
zf-B_box 94..>122 CDD:279037 10/57 (18%)
iSH2_PI3K_IA_R 131..231 CDD:304922 28/160 (18%)
NHL_TRIM71_like 1234..1517 CDD:271324
YncE 1253..>1517 CDD:225926
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
C45G7.4NP_500203.1 RAD18 19..>184 CDD:227719 46/167 (28%)
RING_Ubox 23..73 CDD:388418 21/50 (42%)
RING-HC finger (C3HC4-type) 24..72 CDD:319361 20/48 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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