Sequence 1: | NP_001137707.1 | Gene: | tn / 37190 | FlyBaseID: | FBgn0265356 | Length: | 1517 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498026.1 | Gene: | nhl-2 / 175654 | WormBaseID: | WBGene00003598 | Length: | 1032 | Species: | Caenorhabditis elegans |
Alignment Length: | 1324 | Identity: | 242/1324 - (18%) |
---|---|---|---|
Similarity: | 411/1324 - (31%) | Gaps: | 473/1324 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 348 RKFGERPQRSATQANNDRYGRSGGDYDYENDYDNEGSSGRAGKSSRFRSRFVRSHQND------- 405
Fly 406 -DSDSEQQQQQRQQELKERKDRVLD-----SEDVSRGQLS------------------------- 439
Fly 440 ------------GIIRLSDCS---------RVVQ-------RLADIGKEKKE-------KKSDAA 469
Fly 470 AAAQAAVQAAIQAQK----------AAMQRQQQKNQQNAADEEELARQKRKNAGSSSTGGAATST 524
Fly 525 SSGGGDTASDQRVAALKNRGGEESDGSSNQAASPVRNSAASTT-RAEVSVNEANTEEEGVASESS 588
Fly 589 DSEEDEEVEDEDEEEEVDEEEEQVEESVEEEEAPRELLNLPEEALQPTSSEVTEEEESSSEYEEV 653
Fly 654 TATESE-------EEQEEVEGRVIEIESQDLPVI-------NVLPPENDIAHKVE-------ESP 697
Fly 698 VDHISNQ-------ELMEETDKSTDESPEEEEEEEYTEEEIESKPPVSAQVAAVKKTQRSGSSDS 755
Fly 756 SASTESSASSAAAAAVAATSTSATAAAPATSSSNSTSQNAKAPSSSRYSTARDTTAVPEKKPFVS 820
Fly 821 RFLPQHSTASTTNGSADKKKA----ESSSSSEEETSSESESESEPETKAKSSATSSTTNT----- 876
Fly 877 -----KSTPNSAASSTTAASSSTTSGSYRDRLEARRASRDDSSSTAAGRSSYATPSSSGYGSGSG 936
Fly 937 TTGGRTRAVPAPHHTSESEDRYGSGTGSSYTSRFLNKSKSSAIVTQPSLSTPTASFDEDATGTGD 1001
Fly 1002 DSDSRYGTGRSRYLAMKERRTRLARSRSSHQFGNDDEDLDEPVSPTTVSPSAYLASRCAYSGYGS 1066
Fly 1067 SDLSRSRSSHALKSRDNSPITDRGAGSSRSSGLGGSSTTDSKDGEALSSWARYLKNKYGNKSSKD 1131
Fly 1132 SAGSSGSARDTHAGSSTSSSAAASSSHAHGYGSGTSGSSGRSTASDVSRRLSLGLPLRQANELAS 1196
Fly 1197 SDDDGSKNGLGSPTSPTVAAAVAAAGITGAAGTIPKQVYLRKRQQLFQLGGRGSEPGSFTWPRGL 1261
Fly 1262 AVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDC-------LAGVAVNRIGQYIIA 1319
Fly 1320 DRYNH---RIQVLDPQGRFLRAF--------------GSQGTADGKFNYPWGVTTDALGFIYVCD 1367
Fly 1368 KENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGKVLST 1432
Fly 1433 VGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQ--IFNPDGSFLKTFGSWGSGDSEFK--GL 1493
Fly 1494 EGVAIMSNGNILVCDRENHRVQVF 1517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tn | NP_001137707.1 | RING | 9..54 | CDD:238093 | |
zf-B_box | 94..>122 | CDD:279037 | |||
iSH2_PI3K_IA_R | 131..231 | CDD:304922 | |||
NHL_TRIM71_like | 1234..1517 | CDD:271324 | 71/310 (23%) | ||
YncE | 1253..>1517 | CDD:225926 | 67/291 (23%) | ||
NHL repeat | 1258..1297 | CDD:271324 | 11/38 (29%) | ||
WD40 repeat | 1261..1304 | CDD:293791 | 11/42 (26%) | ||
NHL repeat | 1305..1344 | CDD:271324 | 10/55 (18%) | ||
WD40 repeat | 1345..1377 | CDD:293791 | 8/31 (26%) | ||
NHL repeat | 1352..1388 | CDD:271324 | 10/35 (29%) | ||
NHL repeat | 1396..1436 | CDD:271324 | 9/39 (23%) | ||
WD40 repeat | 1402..1439 | CDD:293791 | 8/36 (22%) | ||
NHL repeat | 1445..1475 | CDD:271324 | 10/31 (32%) | ||
WD40 repeat | 1446..1485 | CDD:293791 | 12/40 (30%) | ||
NHL repeat | 1491..1517 | CDD:271324 | 6/27 (22%) | ||
nhl-2 | NP_498026.1 | RING | 62..>86 | CDD:214546 | 10/25 (40%) |
BBOX | 173..217 | CDD:197662 | 7/43 (16%) | ||
BBOX | 233..272 | CDD:197662 | 5/39 (13%) | ||
BBC | 280..406 | CDD:128778 | 27/137 (20%) | ||
NHL_brat_like | 729..1009 | CDD:271329 | 75/351 (21%) | ||
NHL repeat | 754..788 | CDD:271329 | 10/35 (29%) | ||
NHL repeat | 799..843 | CDD:271329 | 10/47 (21%) | ||
NHL repeat | 846..887 | CDD:271329 | 10/46 (22%) | ||
NHL repeat | 891..930 | CDD:271329 | 9/43 (21%) | ||
NHL repeat | 935..974 | CDD:271329 | 12/43 (28%) | ||
NHL repeat | 980..1006 | CDD:271329 | 6/25 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D133242at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |