Sequence 1: | NP_001137707.1 | Gene: | tn / 37190 | FlyBaseID: | FBgn0265356 | Length: | 1517 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001040817.2 | Gene: | nhl-3 / 173452 | WormBaseID: | WBGene00003599 | Length: | 698 | Species: | Caenorhabditis elegans |
Alignment Length: | 339 | Identity: | 82/339 - (24%) |
---|---|---|---|
Similarity: | 140/339 - (41%) | Gaps: | 76/339 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 5 EQLLTCCVCLDRY----RIPKLLPCQHSFCMEPCMEGLVDYVRR----QVKCPECRAEHRIPYNG 61
Fly 62 VQAFPTNVTLQRFLE-LHIEITGELPDPTSGQIMERCGVCSEKA--YLSHCAHCEKKICEDCKSA 123
Fly 124 HMD-------------ILRR--EITRFNSQIRRSLHRLQDSLAIIEKNTMSLQTNAISVTEEIDE 173
Fly 174 IYQRITKAIKDRSDQLKGEIDRYLAVELRNLTTLKENLDLEITNITSNCDTVDKYMNETVEWDDC 238
Fly 239 ELMDTKEIFLKTVEFLRHFEYENND--YSRRV------RFL-VSIDPNQLVM----NLATFGDLN 290
Fly 291 IAPHSTPSGGSVSS 304 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tn | NP_001137707.1 | RING | 9..54 | CDD:238093 | 21/52 (40%) |
zf-B_box | 94..>122 | CDD:279037 | 8/29 (28%) | ||
iSH2_PI3K_IA_R | 131..231 | CDD:304922 | 21/99 (21%) | ||
NHL_TRIM71_like | 1234..1517 | CDD:271324 | |||
YncE | 1253..>1517 | CDD:225926 | |||
NHL repeat | 1258..1297 | CDD:271324 | |||
WD40 repeat | 1261..1304 | CDD:293791 | |||
NHL repeat | 1305..1344 | CDD:271324 | |||
WD40 repeat | 1345..1377 | CDD:293791 | |||
NHL repeat | 1352..1388 | CDD:271324 | |||
NHL repeat | 1396..1436 | CDD:271324 | |||
WD40 repeat | 1402..1439 | CDD:293791 | |||
NHL repeat | 1445..1475 | CDD:271324 | |||
WD40 repeat | 1446..1485 | CDD:293791 | |||
NHL repeat | 1491..1517 | CDD:271324 | |||
nhl-3 | NP_001040817.2 | RING-HC_TRIM32_C-VII | 24..74 | CDD:319501 | 19/50 (38%) |
Bbox_SF | 111..>134 | CDD:381767 | 7/22 (32%) | ||
Smc | <164..310 | CDD:224117 | 36/169 (21%) | ||
Filamin | <344..422 | CDD:366210 | |||
NHL | 452..696 | CDD:302697 | |||
NHL repeat | 489..528 | CDD:271320 | |||
NHL repeat | 530..570 | CDD:271320 | |||
NHL repeat | 572..610 | CDD:271320 | |||
NHL repeat | 621..659 | CDD:271320 | |||
NHL repeat | 670..695 | CDD:271320 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D133242at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |