Sequence 1: | NP_001137707.1 | Gene: | tn / 37190 | FlyBaseID: | FBgn0265356 | Length: | 1517 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031753313.1 | Gene: | trim3 / 100497041 | XenbaseID: | XB-GENE-5826034 | Length: | 790 | Species: | Xenopus tropicalis |
Alignment Length: | 793 | Identity: | 201/793 - (25%) |
---|---|---|---|
Similarity: | 306/793 - (38%) | Gaps: | 175/793 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 798 PSSSRYS--TARDTTAVPEKKPFVSRFLPQHSTASTTNGSADKKKAESSSSSEEETSSESESESE 860
Fly 861 PETKAKSSATSSTTNTKSTPNSAASS--------TTAASSSTTSGSY--------RDRLEARRAS 909
Fly 910 RDDSSSTAAGRSSYATPSSSGYGSGSGTTGGRTRAVPAPHHTSESEDRYGSGTGSSY--TSRFLN 972
Fly 973 KSKSSAI------------VTQPSLST---------PTASFDEDATGTGDDSDSRYGTGRSRYLA 1016
Fly 1017 MKERRTRLARSRSSHQFGNDDEDLDEPVSPTTVSPSAYLASRCAYSGYGSSDLSRS-RSSHALKS 1080
Fly 1081 RDNSPITDRGAGSSRSSGLGGSS-----TTDSKDGEALSSWARYLKNKYGNKSSKDSAGSSGSAR 1140
Fly 1141 DTHAGS-STSSSAAASSSHAHG---YGSGTSGSSGRSTA----------SDVSRRLSLGLPLRQA 1191
Fly 1192 NELASSDDDGSKNGLGSPTSPTVAAAVAAAGITGAAGTIPKQVYLRKR--------QQLFQLGGR 1248
Fly 1249 GSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFDCLAGVAVNRI 1313
Fly 1314 GQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDKENHRVQVFQS 1378
Fly 1379 DGSFVGKFGSCGRGE----GQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNGKVLSTVGGEGSD 1439
Fly 1440 DGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDSEFKGLEGVAIMSNGNI 1504
Fly 1505 LVCDRENHRVQVF 1517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tn | NP_001137707.1 | RING | 9..54 | CDD:238093 | |
zf-B_box | 94..>122 | CDD:279037 | |||
iSH2_PI3K_IA_R | 131..231 | CDD:304922 | |||
NHL_TRIM71_like | 1234..1517 | CDD:271324 | 105/294 (36%) | ||
YncE | 1253..>1517 | CDD:225926 | 101/267 (38%) | ||
NHL repeat | 1258..1297 | CDD:271324 | 16/38 (42%) | ||
WD40 repeat | 1261..1304 | CDD:293791 | 17/42 (40%) | ||
NHL repeat | 1305..1344 | CDD:271324 | 13/38 (34%) | ||
WD40 repeat | 1345..1377 | CDD:293791 | 8/31 (26%) | ||
NHL repeat | 1352..1388 | CDD:271324 | 14/35 (40%) | ||
NHL repeat | 1396..1436 | CDD:271324 | 14/39 (36%) | ||
WD40 repeat | 1402..1439 | CDD:293791 | 12/36 (33%) | ||
NHL repeat | 1445..1475 | CDD:271324 | 17/29 (59%) | ||
WD40 repeat | 1446..1485 | CDD:293791 | 21/38 (55%) | ||
NHL repeat | 1491..1517 | CDD:271324 | 9/25 (36%) | ||
trim3 | XP_031753313.1 | RAD18 | 54..>150 | CDD:227719 | 14/57 (25%) |
RING_Ubox | 63..107 | CDD:418438 | 3/10 (30%) | ||
Bbox2_TRIM3_C-VII | 154..198 | CDD:380883 | 8/58 (14%) | ||
BBC | 203..328 | CDD:128778 | 26/155 (17%) | ||
IG_FLMN | 369..463 | CDD:214720 | 21/96 (22%) | ||
NHL_TRIM2_like | 513..790 | CDD:271330 | 105/282 (37%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 279 | 1.000 | Inparanoid score | I2846 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D133242at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm48592 | |
Panther | 1 | 1.100 | - | - | O | PTHR24104 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2677 |
SonicParanoid | 1 | 1.000 | - | - | X1654 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.100 |