| Sequence 1: | NP_001137707.1 | Gene: | tn / 37190 | FlyBaseID: | FBgn0265356 | Length: | 1517 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_002932735.1 | Gene: | nhlrc1 / 100492212 | XenbaseID: | XB-GENE-1010800 | Length: | 398 | Species: | Xenopus tropicalis |
| Alignment Length: | 308 | Identity: | 74/308 - (24%) |
|---|---|---|---|
| Similarity: | 112/308 - (36%) | Gaps: | 70/308 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1252 PGSFT-------W-----PRGLAV-GPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGNGEGEFD 1303
Fly 1304 CLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGFIYVCDK 1368
Fly 1369 ENHRVQVFQSD-GSFVGKFGSCGRG--------EGQLEHPHYIAVSNTNRVIV---------SDS 1415
Fly 1416 NNHRIQIFDVNGKVLSTVGGEGSDDGQFKFP-----RGVAVDDQGYIFVADSGNNRIQIF---NP 1472
Fly 1473 DGSFLKTFGSWGSGDSEFKGLE---GVAIMSNGNILVCDRENHRVQVF 1517 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| tn | NP_001137707.1 | RING-HC_NHL-1-like | 3..55 | CDD:438187 | |
| CC_brat-like | 124..232 | CDD:475168 | |||
| NHL_TRIM71_like | 1234..1517 | CDD:271324 | 73/306 (24%) | ||
| NHL repeat | 1258..1297 | CDD:271324 | 11/39 (28%) | ||
| WD40 repeat | 1261..1304 | CDD:293791 | 9/43 (21%) | ||
| NHL repeat | 1305..1344 | CDD:271324 | 8/38 (21%) | ||
| WD40 repeat | 1345..1377 | CDD:293791 | 7/31 (23%) | ||
| NHL repeat | 1352..1388 | CDD:271324 | 10/36 (28%) | ||
| NHL repeat | 1396..1436 | CDD:271324 | 12/48 (25%) | ||
| WD40 repeat | 1402..1439 | CDD:293791 | 11/45 (24%) | ||
| NHL repeat | 1445..1475 | CDD:271324 | 13/37 (35%) | ||
| WD40 repeat | 1446..1485 | CDD:293791 | 16/46 (35%) | ||
| NHL repeat | 1491..1517 | CDD:271324 | 8/28 (29%) | ||
| nhlrc1 | XP_002932735.1 | RING-HC_malin | 26..75 | CDD:438179 | |
| NHL_TRIM32_like | 124..397 | CDD:271331 | 71/301 (24%) | ||
| NHL repeat | 135..175 | CDD:271331 | 11/39 (28%) | ||
| NHL repeat | 183..222 | CDD:271331 | 9/44 (20%) | ||
| NHL repeat | 224..265 | CDD:271331 | 11/50 (22%) | ||
| NHL repeat | 267..319 | CDD:271331 | 13/54 (24%) | ||
| NHL repeat | 327..359 | CDD:271331 | 12/32 (38%) | ||
| NHL repeat | 370..396 | CDD:271331 | 6/25 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||