DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment tn and rnf152

DIOPT Version :9

Sequence 1:	NP_001137707.1	Gene:	tn / 37190	FlyBaseID:	FBgn0265356	Length:	1517	Species:	Drosophila melanogaster
Sequence 2:	XP_004915369.1	Gene:	rnf152 / 100486837	XenbaseID:	XB-GENE-1001845	Length:	203	Species:	Xenopus tropicalis

Alignment Length:	134	Identity:	34/134 - (25%)
Similarity:	51/134 - (38%)	Gaps:	49/134 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MEQFEQ--LLTCCVCLDRY---RIPKLLPCQHSFCMEPCMEGLVDYVRRQVKCPECRAEHRIPYN 60
            ||...|  ||.|.:|.:.|   |.||||.|:|: |...|::.: ...::.::||.||
Frog     1 METLSQDSLLECQICFNYYSPRRRPKLLDCKHT-CCSVCLQQM-RASQKDLRCPWCR-------- 55

  Fly    61 GVQAFPTNVTLQRFLELHIEITGELPD-----------------------PTSGQIMERCGVCSE 102
            ||...|...::           .:|||                       |::|..|....|..|
Frog    56 GVTKLPPGYSV-----------SQLPDDPDVVAVIAIPHASENTPVFIKLPSNGCYMWPLPVSKE 109

  Fly   103 KAYL 106
            :|.|
Frog   110 RALL 113

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
tn	NP_001137707.1	RING	9..54	CDD:238093	16/47 (34%)
		zf-B_box	94..>122	CDD:279037	5/13 (38%)
		iSH2_PI3K_IA_R	131..231	CDD:304922
		NHL_TRIM71_like	1234..1517	CDD:271324
		YncE	1253..>1517	CDD:225926
		NHL repeat	1258..1297	CDD:271324
		WD40 repeat	1261..1304	CDD:293791
		NHL repeat	1305..1344	CDD:271324
		WD40 repeat	1345..1377	CDD:293791
		NHL repeat	1352..1388	CDD:271324
		NHL repeat	1396..1436	CDD:271324
		WD40 repeat	1402..1439	CDD:293791
		NHL repeat	1445..1475	CDD:271324
		WD40 repeat	1446..1485	CDD:293791
		NHL repeat	1491..1517	CDD:271324
rnf152	XP_004915369.1	RING-HC_RNF152	11..55	CDD:319462	14/45 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D489543at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920