DRSC/TRiP Functional Genomics Resources

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Protein Alignment tn and btr22

DIOPT Version :10

Sequence 1:NP_001137707.1 Gene:tn / 37190 FlyBaseID:FBgn0265356 Length:1517 Species:Drosophila melanogaster
Sequence 2:XP_073787489.1 Gene:btr22 / 100144555 ZFINID:ZDB-GENE-080402-4 Length:533 Species:Danio rerio


Alignment Length:350 Identity:64/350 - (18%)
Similarity:121/350 - (34%) Gaps:104/350 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LTCCVCLDRYRIPKLLPCQHSF---CMEPCMEGLVDYVRRQVKCPEC------RAEHRIPYNGVQ 63
            |.|.:||:.:..|...||.|:|   |:..|...     .:...||.|      |.:.:|      
Zfish    11 LQCSICLEVFTDPVSTPCGHNFCRSCLNKCWNN-----SQTCSCPYCKETFTQRPDLKI------ 64

  Fly    64 AFPTNVTLQRFLELHIEITGELPDPTSGQIMERCGVCSEKAY--LSHCAHCEKKICEDCKSAHMD 126
                |.||:...| |.:   |.......:::  |.||.::..  |..|..|:...|:.....|:.
Zfish    65 ----NTTLREISE-HCK---EKRPEEKAEVV--CDVCVDRKLEALKSCLVCQSSYCQTHLEPHLR 119

  Fly   127 I--LRREITRFNSQIRRSLHRLQDSLA-----IIEKNTMSLQT---------------------N 163
            :  |::             |:|.|.:.     |.:|:...|:.                     |
Zfish   120 VAGLKK-------------HKLMDPVRNLEDYICQKHDRPLELFCRDDQTCVCLYCLVTDHKNHN 171

  Fly   164 AISVTEEIDEIYQRITKAIKDRSDQLKGEIDRYLAVE----LRNLTTLKE-----NLDLEITNIT 219
            .:.|.||.:|....:.|..||....::..|.:...|:    :|.:.:.||     .:..::....
Zfish   172 TVPVQEESEEKKTELMKTQKDVQQMIQDRIKKIQQVKHSAGVRKINSEKEKAAHVEIFTDLIRSI 236

  Fly   220 SNCDT------------VDKYMNETVEWDDCELMDTKEIFLKTVEFLRHFEYENNDYSR-RVRFL 271
            ..|.|            .:|...|.:|..:.|:.:.|         :|:.|.|...::. .:..|
Zfish   237 ERCQTELLEMMEEQQKAAEKQEKELIEELEQEITELK---------MRNTELEQLSHTEDHLHLL 292

  Fly   272 VSIDPNQLVMNLATFGDLNIAPHST 296
            .|....|...:...:.::::..|::
Zfish   293 QSYSSLQRPTDTRNWNEISLKTHNS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tnNP_001137707.1 RING-HC_NHL-1-like 3..55 CDD:438187 15/55 (27%)
CC_brat-like 124..232 CDD:475168 24/156 (15%)
NHL_TRIM71_like 1234..1517 CDD:271324
NHL repeat 1258..1297 CDD:271324
WD40 repeat 1261..1304 CDD:293791
NHL repeat 1305..1344 CDD:271324
WD40 repeat 1345..1377 CDD:293791
NHL repeat 1352..1388 CDD:271324
NHL repeat 1396..1436 CDD:271324
WD40 repeat 1402..1439 CDD:293791
NHL repeat 1445..1475 CDD:271324
WD40 repeat 1446..1485 CDD:293791
NHL repeat 1491..1517 CDD:271324
btr22XP_073787489.1 None
Blue background indicates that the domain is not in the aligned region.

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