Sequence 1: | NP_001137707.1 | Gene: | tn / 37190 | FlyBaseID: | FBgn0265356 | Length: | 1517 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001014393.1 | Gene: | trim2a / 100003782 | ZFINID: | ZDB-GENE-050327-99 | Length: | 744 | Species: | Danio rerio |
Alignment Length: | 805 | Identity: | 210/805 - (26%) |
---|---|---|---|
Similarity: | 311/805 - (38%) | Gaps: | 192/805 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 793 QNAKAPSSSRYS--TARDTTAVPEK--KPFVSRFLPQHSTASTTNGSADKKKAESSSSSEEETSS 853
Fly 854 ESESESEPETKAKSSATSSTTNTKSTPNSAAS--------STTAASSSTTSGSY--------RDR 902
Fly 903 LEARRASRDDSSSTAAGR----------------------SSYATPSSSGYGSGSGTTGGRTRAV 945
Fly 946 PAPHHTSESEDRYGSGTGSSYTSRFLNKSKSSAIVTQPSLSTPTASFDEDATGTGDDSDSRYGTG 1010
Fly 1011 RSRYLAMKERRTRLARSRSSHQFGNDDEDLDEPVSPTTVSPSAYLASRCAYSGYGSSDLSRSRSS 1075
Fly 1076 HALKSRDNSPI-----TDRGAGSSRS-SGLGGSSTTDSKDGEALSSWARYLKNKYGNKSS----- 1129
Fly 1130 KDSAGSSGSARDTHAGSSTSSSAAASSSHAHG----YGSGT------SGSSGRSTASDVSRRLSL 1184
Fly 1185 ------GLPLR-QANELA--SSDDDGSKNGLGSPTSPTVAAAVAAAGITGAAGTIPKQVY-LRKR 1239
Fly 1240 QQ-------LFQLGGRGSEPGSFTWPRGLAVGPDNSIVVADSSNHRVQVFDSNGIFVKEFGEYGN 1297
Fly 1298 GEGEFDCLAGVAVNRIGQYIIADRYNHRIQVLDPQGRFLRAFGSQGTADGKFNYPWGVTTDALGF 1362
Fly 1363 IYVCDKENHRVQVFQSDGSFVGKFGSCGRGEGQLEHPHYIAVSNTNRVIVSDSNNHRIQIFDVNG 1427
Fly 1428 KVLSTVGGEGSDDGQFKFPRGVAVDDQGYIFVADSGNNRIQIFNPDGSFLKTFGSWGSGDSEFKG 1492
Fly 1493 LEGVAIMSNGNILVCDRENHRVQVF 1517 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tn | NP_001137707.1 | RING | 9..54 | CDD:238093 | |
zf-B_box | 94..>122 | CDD:279037 | |||
iSH2_PI3K_IA_R | 131..231 | CDD:304922 | |||
NHL_TRIM71_like | 1234..1517 | CDD:271324 | 108/290 (37%) | ||
YncE | 1253..>1517 | CDD:225926 | 102/263 (39%) | ||
NHL repeat | 1258..1297 | CDD:271324 | 13/38 (34%) | ||
WD40 repeat | 1261..1304 | CDD:293791 | 14/42 (33%) | ||
NHL repeat | 1305..1344 | CDD:271324 | 14/38 (37%) | ||
WD40 repeat | 1345..1377 | CDD:293791 | 11/31 (35%) | ||
NHL repeat | 1352..1388 | CDD:271324 | 15/35 (43%) | ||
NHL repeat | 1396..1436 | CDD:271324 | 14/39 (36%) | ||
WD40 repeat | 1402..1439 | CDD:293791 | 13/36 (36%) | ||
NHL repeat | 1445..1475 | CDD:271324 | 17/29 (59%) | ||
WD40 repeat | 1446..1485 | CDD:293791 | 21/38 (55%) | ||
NHL repeat | 1491..1517 | CDD:271324 | 9/25 (36%) | ||
trim2a | NP_001014393.1 | RING | 23..66 | CDD:238093 | 6/17 (35%) |
BBOX | 112..153 | CDD:197662 | 8/40 (20%) | ||
BBC | 160..286 | CDD:128778 | 27/173 (16%) | ||
IG_FLMN | 324..421 | CDD:214720 | 22/103 (21%) | ||
Filamin | 324..417 | CDD:279024 | 21/99 (21%) | ||
NHL_TRIM2_like | 471..744 | CDD:271330 | 106/278 (38%) | ||
YncE | 486..>735 | CDD:225926 | 99/256 (39%) | ||
NHL repeat | 489..528 | CDD:271330 | 13/38 (34%) | ||
NHL repeat | 536..575 | CDD:271330 | 15/43 (35%) | ||
NHL repeat | 578..615 | CDD:271330 | 16/36 (44%) | ||
NHL repeat | 622..663 | CDD:271330 | 14/40 (35%) | ||
NHL repeat | 669..711 | CDD:271330 | 23/43 (53%) | ||
NHL repeat | 714..740 | CDD:271330 | 9/26 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 282 | 1.000 | Inparanoid score | I2861 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D133242at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm25398 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24104 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2677 |
SonicParanoid | 1 | 1.000 | - | - | X1654 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.100 |