DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18605 and AT3G05670

DIOPT Version :10

Sequence 1:NP_001188974.1 Gene:CG18605 / 37189 FlyBaseID:FBgn0034411 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_187218.1 Gene:AT3G05670 / 819734 AraportID:AT3G05670 Length:883 Species:Arabidopsis thaliana


Alignment Length:234 Identity:48/234 - (20%)
Similarity:82/234 - (35%) Gaps:63/234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SLYSLPDRETGDFRGWSPEYFRLNPFEVHRVMMWVNRDVSVLIRTRKADIFYLYETIKNLLPRLK 81
            :|:| |....||.:|.||.                ....:.|.|.|.     |:..|:|::...:
plant   604 NLFS-PRIPNGDAQGSSPS----------------GLGATTLSRRRT-----LHRHIQNIINGDR 646

  Fly    82 LDSEEFRKPMIHFFGANTDLFIHELINFARS--PYDTLMAYECSTQYRALLDFDNGPTTSA--KS 142
            |.:...|..     |.::|.|:...|...|:  |...:.:.|......|:.: :..|..::  .:
plant   647 LINMGARTG-----GTSSDGFVTTQIGHGRTIDPSQPVASQETGISLYAISE-ERLPNNNSLISA 705

  Fly   143 RDREFLSTRLHSFVEFTRRINYDDCGGFEADLELEDEDF-GELDDMMMERYG---GAPF------ 197
            .|.|.||.:|            |:.|..||...|.:..| ||....:...:|   |.|.      
plant   706 HDPELLSPKL------------DEFGSEEAFRRLSNNTFLGERPIDLGFHHGLAQGDPLVSNQQR 758

  Fly   198 --------LMKMDGQLVTARIIPSSQANAPNQGQVNQQT 228
                    :..|.|:.:..| :.:...|..:|..:.|.|
plant   759 LHSHMPNTMSSMAGERLQER-VKAHLKNLSSQNDLGQTT 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18605NP_001188974.1 None
AT3G05670NP_187218.1 RING-HC_Topors 411..458 CDD:438236
PHD_SF 506..549 CDD:473978
Blue background indicates that the domain is not in the aligned region.

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