DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18605 and toporsb

DIOPT Version :9

Sequence 1:NP_001188974.1 Gene:CG18605 / 37189 FlyBaseID:FBgn0034411 Length:415 Species:Drosophila melanogaster
Sequence 2:XP_003201680.1 Gene:toporsb / 796087 ZFINID:ZDB-GENE-110728-3 Length:939 Species:Danio rerio


Alignment Length:408 Identity:84/408 - (20%)
Similarity:146/408 - (35%) Gaps:111/408 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MVQWRIYVYANSLYSLPDRETGDFRGWSPEYFRLNPFEVHRVMMWVNRDVSVLIRTRKADIFYLY 70
            :|.:|..:|...:.....|:....|..|..:.|.||..:.|::.|:.|:::||..:..:.:..:.
Zfish   188 VVAFRRALYRTGVRVRSARDASRQRDISASFLRQNPGCLRRLLPWLQRELTVLYGSHGSLVNIVQ 252

  Fly    71 ETIKNLLPRLKLDSEEFRKPMIHFFGANTDLFIHELINFARS-----PYDTLMAYECSTQYRALL 130
            ..|.:.:....::....|..:..|..|.||.|:|||::||||     .||....|:|        
Zfish   253 NVIISRIMNYNMEESIIRDELRPFLLARTDHFLHELVSFARSSLNMEAYDLQAVYDC-------- 309

  Fly   131 DFDNGPTTSAKSRDREFLSTRLHSFVEFTRRINYDDCGGFEADLEL----EDEDFGELDDMMMER 191
                 |..|                        |::  |..:||.:    |||:..:.::.::| 
Zfish   310 -----PAPS------------------------YEE--GSSSDLSVIAISEDEEDNDSENNVIE- 342

  Fly   192 YGGAPFLMKMDGQLVTARIIPSSQANAP----NQGQVNQQT---------QSQAQAQAQAQAQVQ 243
                      :...|..||...:.|:..    :|...:.:|         ||..|:|.:......
Zfish   343 ----------NPSAVQERIASVATASGTDSLLSQSAWDDETPGPSYSSILQSSNQSQDEGAEPSS 397

  Fly   244 AQAQAQAQTQAQTQAQALAQAQAQAQV----QAQPQA----------------QVQQAAA--QPA 286
            :.|...|.|.. |...|::.|..:.:.    ..:|.|                :.|||||  .||
Zfish   398 STAPPLASTDG-TDPAAISAADEEEECLIVGYVKPMAERTPELVQLSSDSSEEEEQQAAATETPA 461

  Fly   287 QLLLPQLTQAVIQTQQRAVHQPQQSGQQSGPQHASSTAALATPLEDLE-LGFAIERSMFVGASNA 350
            .:...:..|:.:......  :|......:||  |.|.:..|.|....| |.|:.||.        
Zfish   462 TVTKSETGQSQLPLPSHM--KPLSPSSFAGP--APSCSPQANPSVPQEILSFSRERE-------- 514

  Fly   351 DQGGDFILPYGQVFRFAN 368
               .|:...:|...|.|:
Zfish   515 ---SDYYSSHGHRSRLAS 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18605NP_001188974.1 None
toporsbXP_003201680.1 RING 32..75 CDD:238093
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579330
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003652
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.930

Return to query results.
Submit another query.