DRSC/TRiP Functional Genomics Resources

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Protein Alignment Topors and toporsb

DIOPT Version :9

Sequence 1:NP_001261083.1 Gene:Topors / 37188 FlyBaseID:FBgn0267351 Length:1038 Species:Drosophila melanogaster
Sequence 2:XP_003201680.1 Gene:toporsb / 796087 ZFINID:ZDB-GENE-110728-3 Length:939 Species:Danio rerio


Alignment Length:1028 Identity:237/1028 - (23%)
Similarity:391/1028 - (38%) Gaps:231/1028 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPECPLCKQPFRTIIHNVRTLDDYDRY- 160
            ||...|.|||.........|.|:|||||:|:.||||.|.|||||||||.:|.|:|:..:|:..: 
Zfish    28 SPDSKCPICLDGFNNVASLDRCLHQFCFRCIHEWSKNKAECPLCKQPFHSIFHSVKGENDFKEFV 92

  Fly   161 ---PVQTTSPVPTENPS---LRYHIVRR------------PRYTPLVQNQAVIVNDIEAAIAAGA 207
               |....:.....:||   ||..::||            |..||.:::. |:.:.:..| ||.|
Zfish    93 LWPPENGAANANAADPSERVLRPRVLRRRERRSNRVQTPAPSSTPPIEDD-VMFDGLSDA-AALA 155

  Fly   208 AGEDV------LSAAEVAAGR-RSYSRFEPYRSELMNYYQHDQDASTSGSLSQLWRRYVYDRKLY 265
            ..:||      |:|.....|. ||..|.            .:||...       :||.:|...:.
Zfish   156 ENQDVQQMMLRLTARRAGRGEGRSLRRL------------REQDVVA-------FRRALYRTGVR 201

  Fly   266 ALPVSDSVTGHFREWSARFYRNNPAQIHRLMPWIHRDIMCLLRNAAHSVNTVMTLMSDLLPMTSL 330
            .....|:  ...|:.||.|.|.||..:.||:||:.|::..|..:....||.|..::...:...::
Zfish   202 VRSARDA--SRQRDISASFLRQNPGCLRRLLPWLQRELTVLYGSHGSLVNIVQNVIISRIMNYNM 264

  Fly   331 LGPTFRRRLSPYLGERTSHFIHELFNFARSPYDINGYDHVVQYSARVAEEVEVDLLDMVETQSSN 395
            .....|..|.|:|..||.||:|||.:||||..::..||....|........|....|:.....|.
Zfish   265 EESIIRDELRPFLLARTDHFLHELVSFARSSLNMEAYDLQAVYDCPAPSYEEGSSSDLSVIAISE 329

  Fly   396 GDDLNLEVGDSDADAINAGFSPDWSPPRVRPSTSVIVTNPGATHSFSVTMASDGSELPG---ISI 457
            .::.|    ||:.:.|.       :|..|:...:.:.|..|.....|.:...|  |.||   .||
Zfish   330 DEEDN----DSENNVIE-------NPSAVQERIASVATASGTDSLLSQSAWDD--ETPGPSYSSI 381

  Fly   458 RRTTNVGSQTVAINLSMRRPAAVASEEPEVIEIDDGDAAANAEVAAINDGSNTSRRHAGATLPVT 522
            .:::|......|              ||         :::.|...|..||::.:           
Zfish   382 LQSSNQSQDEGA--------------EP---------SSSTAPPLASTDGTDPA----------- 412

  Fly   523 AHIELESSSSSGDEDECVFVLELKPPHMRTPEQVSLDSNSDSDVVFVNEQHEAA---PDAIAENR 584
                  :.|::.:|:||:.|..:||...||||.|.|.|:|..:    .||..||   |..:.::.
Zfish   413 ------AISAADEEEECLIVGYVKPMAERTPELVQLSSDSSEE----EEQQAAATETPATVTKSE 467

  Fly   585 STQSPLDLASRDQGL----FMGPSTS-GAAAN--------------------------RGKNWKL 618
            :.||.|.|.|..:.|    |.||:.| ...||                          |..:|..
Zfish   468 TGQSQLPLPSHMKPLSPSSFAGPAPSCSPQANPSVPQEILSFSRERESDYYSSHGHRSRLASWSE 532

  Fly   619 VMAQTRRLDQLRTLRSIRSKKSRRSSMPARSDSG--SSPSSCSSSSFHFSSSSDEDSSDSSTTNS 681
            :....||.|:.......::|...:...|...:..  .||.|.|..|...|..|....|.|..::.
Zfish   533 LRVHGRRKDRSHRHNKEKAKSIEQIQQPTTLECSPMHSPQSWSGQSSAVSICSISPGSPSYDSDY 597

  Fly   682 EP-PKKKSRK---RVANNKRSKKESIGKRTSRKRKAKDQNMEML----EQQQISQKKPQRQPESS 738
            .| ||.|.||   ||....|......|::::::|.::..::::.    ..::..:.:.:|:...|
Zfish   598 SPSPKTKGRKHSCRVQERIRQSPSYSGRKSTKERMSRSPDLDLFIGSHHPRESKRHRKRRKRSVS 662

  Fly   739 SDSPSSSDDESGGDSSESSGQPNTNN--NKSSSDSDDDSAVNMQLSALRATLKAEATLEDRKP-- 799
            |.|..|..::|..|......:..|.:  ..:....::.:....:.|.||:        .||.|  
Zfish   663 SSSADSHSEKSCLDKPSGKRKYKTRHLERAAQRQHEEGNPSKEKRSKLRS--------RDRSPSV 719

  Fly   800 -VKLELQLPDDDQAGPLHSRMTPSPRED-NEPGC----SAPKRRRSC------------------ 840
             :..|.:.||.........:.....|:| :.|..    |...|...|                  
Zfish   720 EIIYERRAPDPHWVSRKKKKKHRKRRKDLDSPTVITIDSDSDRTIDCLDRVMDVIDQTAADIEQR 784

  Fly   841 SHSNQSSQSASLASSSTATSSSAPLSSFAWGAAGFSGDPLMRGHPAMEEHDIANSLIELSTLTQP 905
            ..:::.:::.::|||:..:.||:|:.         ..||  ....::...|....:::.|:....
Zfish   785 DGTSEQAETCTVASSNLFSESSSPVR---------PSDP--TNEQSLNLDDCVVDVVDQSSSDCS 838

  Fly   906 VNIGLFNEHYNSAENSMGMLSNTLCDSPQTLAADD--ANLENYFDTDADPEASRERDAYSLEAAI 968
            .||...| |.....:...|.|.|...|..|...:.  .:||.:...: :||              
Zfish   839 HNIDSSN-HEEIVPDPFPMSSITTAPSSDTRLLESILQDLEEFLPAE-EPE-------------- 887

  Fly   969 DVVGESELQIAEDTATATEEQD-----EEDEEDEDQEEDDQEEEKAAEEEEEE 1016
              :|:|.      .|.:..:||     .:|:.|...:.|:.|.:....:|.:|
Zfish   888 --IGQSA------CARSPVQQDLTSVPPKDQSDTGGDVDNSENKTTGGDEPQE 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ToporsNP_001261083.1 RING 102..144 CDD:238093 24/41 (59%)
toporsbXP_003201680.1 RING 32..75 CDD:238093 24/42 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579332
Domainoid 1 1.000 138 1.000 Domainoid score I4802
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 193 1.000 Inparanoid score I3836
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003652
OrthoInspector 1 1.000 - - otm24963
orthoMCL 1 0.900 - - OOG6_104232
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4653
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.880

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