DRSC/TRiP Functional Genomics Resources

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Protein Alignment Topors and Pex10

DIOPT Version :9

Sequence 1:NP_001261083.1 Gene:Topors / 37188 FlyBaseID:FBgn0267351 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001102875.1 Gene:Pex10 / 680424 RGDID:1591776 Length:324 Species:Rattus norvegicus


Alignment Length:45 Identity:20/45 - (44%)
Similarity:26/45 - (57%) Gaps:1/45 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 PNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPECPLCKQPF 144
            |.|.:||.. ||......|.|.||::|:.||...|.|||||::.|
  Rat   269 PLCTLCLEE-RRHSTATPCGHLFCWECITEWCNTKTECPLCREKF 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ToporsNP_001261083.1 RING 102..144 CDD:238093 18/41 (44%)
Pex10NP_001102875.1 Pex2_Pex12 16..216 CDD:282595
zf-RING_2 271..309 CDD:290367 17/38 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23350
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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