DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Topors and CG18605

DIOPT Version :9

Sequence 1:NP_001261083.1 Gene:Topors / 37188 FlyBaseID:FBgn0267351 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001188974.1 Gene:CG18605 / 37189 FlyBaseID:FBgn0034411 Length:415 Species:Drosophila melanogaster


Alignment Length:502 Identity:116/502 - (23%)
Similarity:186/502 - (37%) Gaps:136/502 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 WRRYVYDRKLYALPVSDSVTGHFREWSARFYRNNPAQIHRLMPWIHRDIMCLLRNAAHSVNTVMT 319
            ||.|||...||:||  |..||.||.||..::|.||.::||:|.|::||:..|:|.....:..:..
  Fly     9 WRIYVYANSLYSLP--DRETGDFRGWSPEYFRLNPFEVHRVMMWVNRDVSVLIRTRKADIFYLYE 71

  Fly   320 LMSDLLPMTSLLGPTFRRRLSPYLGERTSHFIHELFNFARSPYD-INGYDHVVQYSA-------- 375
            .:.:|||...|....||:.:..:.|..|..|||||.|||||||| :..|:...||.|        
  Fly    72 TIKNLLPRLKLDSEEFRKPMIHFFGANTDLFIHELINFARSPYDTLMAYECSTQYRALLDFDNGP 136

  Fly   376 ------RVAEEVEVDLLDMVE-TQSSNGDD-----LNLEVGDSDADAIN------AGFSP----- 417
                  |..|.:...|...|| |:..|.||     .:||:.|.|...::      .|.:|     
  Fly   137 TTSAKSRDREFLSTRLHSFVEFTRRINYDDCGGFEADLELEDEDFGELDDMMMERYGGAPFLMKM 201

  Fly   418 --DWSPPRVRPSTSVIVTNPGATHSFSVTMASDGSELPGISIRRTTNVGSQTVAINLSMRRPAAV 480
              .....|:.||:.....|.|                         .|..||      ..:..|.
  Fly   202 DGQLVTARIIPSSQANAPNQG-------------------------QVNQQT------QSQAQAQ 235

  Fly   481 ASEEPEVIEIDDGDAAANAEVAAINDGSNTSRRHAGATLPVTAHIELESSSSSGDEDECVFVLEL 545
            |..:.:|    ...|.|.|:..|.......::..|.|.:......:::.:::             
  Fly   236 AQAQAQV----QAQAQAQAQTQAQTQAQALAQAQAQAQVQAQPQAQVQQAAA------------- 283

  Fly   546 KPPHMRTPEQVSLDSNSDSDVVFVNEQ--HEAAPDAIAENRSTQSPL-DLA---SRDQGLFMGPS 604
            :|..:..|:.......:....|...:|  .::.|...:...:..:|| ||.   :.::.:|:|.|
  Fly   284 QPAQLLLPQLTQAVIQTQQRAVHQPQQSGQQSGPQHASSTAALATPLEDLELGFAIERSMFVGAS 348

  Fly   605 TSGAAANRGKNWKLVMAQTRRLDQLRTLRSIRSKKSRRSSMPARSDSGSSPSSCSSSSFHFSSSS 669
            .    |::|.::.|...|.           .|...:.|::.|                      |
  Fly   349 N----ADQGGDFILPYGQV-----------FRFANTNRAARP----------------------S 376

  Fly   670 DEDSSDSSTTNSEPPKKKSRKRVANNKRSKKESIGKRTSRKRKAKDQ 716
            :.:.|.|...|..|...     |.||.|:.....|    |:|:.::|
  Fly   377 NGNGSGSGVMNPPPAPP-----VPNNPRNASAHQG----RRRRTQNQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ToporsNP_001261083.1 RING 102..144 CDD:238093
CG18605NP_001188974.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447073
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4430
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003652
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23350
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.