DRSC/TRiP Functional Genomics Resources

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Protein Alignment Topors and pas4

DIOPT Version :9

Sequence 1:NP_001261083.1 Gene:Topors / 37188 FlyBaseID:FBgn0267351 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_595592.1 Gene:pas4 / 2539774 PomBaseID:SPBC17A3.10 Length:306 Species:Schizosaccharomyces pombe


Alignment Length:85 Identity:23/85 - (27%)
Similarity:41/85 - (48%) Gaps:10/85 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 NANAIGEPGTSASAAEENGTVERNSPP------PNCAICLSRCRRKCFTDSCMHQFCFKCLCEWS 131
            ::|:..:..|.:|..:|....::|..|      ..|::|:........|: |.|.||:.|:..|:
pombe   221 HSNSYFDQHTISSITDERDLEDKNKLPFIPEGNRKCSLCMEFIHCPAATE-CGHIFCWSCINGWT 284

  Fly   132 KIKPECPLCK---QPFRTII 148
            ..|.|||||:   .|.:.|:
pombe   285 SKKSECPLCRAFSSPSKIIL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ToporsNP_001261083.1 RING 102..144 CDD:238093 15/44 (34%)
pas4NP_595592.1 PEX10 1..306 CDD:227861 23/85 (27%)
RING 255..295 CDD:238093 15/40 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23350
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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