DRSC/TRiP Functional Genomics Resources

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Protein Alignment Topors and C32D5.11

DIOPT Version :9

Sequence 1:NP_001261083.1 Gene:Topors / 37188 FlyBaseID:FBgn0267351 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001364718.1 Gene:C32D5.11 / 174052 WormBaseID:WBGene00016318 Length:728 Species:Caenorhabditis elegans


Alignment Length:900 Identity:174/900 - (19%)
Similarity:297/900 - (33%) Gaps:308/900 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 GDNEAEEPVSAGPDNANAIGEPGTSASAAEENGTVERNSPPPNCAICLS-RCRRKCFTDSCMHQF 122
            ||: ..|||         |..|.||:     |..||.    ..|.|||| |..::|..:.|.|.|
 Worm     2 GDS-GVEPV---------IPSPSTSS-----NNPVEE----LQCTICLSTRFSQECRIEGCNHSF 47

  Fly   123 CFKCLCEW--SKIKPECPLCKQPFRTIIHNVRTLDDYD--------------RYPVQTTSPVPTE 171
            ||.|:.||  ..::|.||:|::....:        .||              .|.....|..||:
 Worm    48 CFSCISEWVCQSLRPSCPMCRKDVDKV--------SYDFSEQKLGQKEIAIKEYRSGHMSLTPTD 104

  Fly   172 NPSLRYHIVRRPRYTPLVQNQAVIVNDIEAAIAAGAAGEDVLSAAEVAAGRRSYSRFEPYRSELM 236
            ...|            |.:.:.|:.|.:.:....|      |.::|::....|....|..::.|:
 Worm   105 RVQL------------LSERRLVVRNLMHSYKVVG------LLSSEISGIEESKEPDEILKNALI 151

  Fly   237 N----YYQHDQDASTSGSLSQL-----------------WRRYVYDRK---LY------------ 265
            .    ..||.|.|..  |||.|                 :||.||..|   :|            
 Worm   152 ELAAIVTQHIQKAEI--SLSDLRTEQARINKSIVFNTVTFRRMVYTSKVKVMYPDLKKVKIKPSD 214

  Fly   266 ---------------------ALPVSD--SVTGHFREWSARFY---------RNNPAQIHRLMPW 298
                                 |:|..:  .:.||  :|..:|.         :...|||:.||  
 Worm   215 IAREPDRFRNVITNFLIAEFDAIPFQNQPKLAGH--KWRTKFLGSCIDMQQKQRYAAQIYELM-- 275

  Fly   299 IHRDIMCLLRNAA-----HSVNTVMTLMSDLLPMTSLLGPTFRRRLSPYLG-ERTS--HFIHELF 355
                   |.|.:.     ..:|.::|      |::::........|...:. |:.:  .|.:|::
 Worm   276 -------LSRPSGDHLFRRELNEILT------PVSAVHIQFLDDHLDAIIAIEKLTIEEFYNEVY 327

  Fly   356 ------NFARSPYDIN--GYDHVVQYSARVAEEVEVDL---LDMVET--------QSSNGDDLNL 401
                  :|:.:.:|.|  |.|........:..::..|:   .|.::|        ||||.|..:.
 Worm   328 YDSIYNSFSSNFFDYNSMGRDDPQSRFEALFNQIHRDIGSTNDWMDTYVAGRLLRQSSNTDGTDR 392

  Fly   402 EV-GDSDADAINAGFSPDWSPPRVRPSTSVIVTNPGATHSFSVTMASDGSELPGISIRRTTNVGS 465
            .. .|.|:|...   ||:...|...|...  ........::...|....:.:| :|:|....:..
 Worm   393 ATNNDDDSDRSE---SPEERVPTPMPDED--PREQSLARAYYEQMLEMPNRVP-LSMRAYHMMRD 451

  Fly   466 QTVAINLSMRRPAAVASEEPEVIEIDDGDAAANAEVAAINDGSNTSRRHAGATLPVTAHIELESS 530
            :.|.:    |.|   .:|||  :.::............|:....|||.|      :|....:...
 Worm   452 RDVRV----RYP---TTEEP--VPVEPVTFGQTTRTLPISQQPTTSRSH------MTLRSAMRRL 501

  Fly   531 SSSGDEDECVFVLELKPPHMRTPEQVSLDSNSDSDVVFVNEQHEAAPDAIAENRSTQSPLDLASR 595
            .|....||.:..:|.:|...|                           .|..:|..|...:..:|
 Worm   502 DSDRPTDEEIPPIESRPQTRR---------------------------EIERDRLLQRVREFDNR 539

  Fly   596 DQG---LFMGPSTSGAAANR----GKNWKLVMAQTRRLDQLRTLRSIRSKKSRRSSMPARSDSGS 653
            .:|   ||..|::|...:.|    |.: .|||...|          :.|..:..:|:|.     .
 Worm   540 SRGLSSLFRHPASSDYTSRRFTSDGYS-GLVMLSPR----------LNSTTTSSTSIPV-----Y 588

  Fly   654 SPSSCSSSSF-------------HFSSSSDEDSSDSSTTNSEPPKKKSRKRVANNKRSKKESIGK 705
            .|.:.:|:.|             ||               .:||:::           :.|.:.:
 Worm   589 QPRTMTSNDFAHLNRTRSILERRHF---------------PQPPREQ-----------RIEEVEQ 627

  Fly   706 RTSRKRKAKDQNMEMLEQQQISQKKPQRQPESSSDSPSSSDDESGGDSSESSGQPNTNNNKSSSD 770
            ..:|..:...|..:.:::...:...|.:.|..::.:|:.||:|     |.|..:.....|:..:|
 Worm   628 LFNRAYQNMQQTHQAIQEHASTSNAPTQIPRPATPAPAISDEE-----SRSLAEIVATINQEDAD 687

  Fly   771 SDDDSAVNMQLSALRATLKAEATLEDRKPVKLELQLPDDDQAGPLHSRMTPSPRE 825
            :..|.     :|....|..|....|:..|       |:    ||...|.|.|.|:
 Worm   688 NGLDF-----ISVAHRTRSARRAAENGHP-------PE----GPPAKRSTNSRRD 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ToporsNP_001261083.1 RING 102..144 CDD:238093 19/44 (43%)
C32D5.11NP_001364718.1 RAD18 24..>114 CDD:227719 27/109 (25%)
RING_Ubox 26..68 CDD:418438 18/41 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto19413
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23350
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9253
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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