DRSC/TRiP Functional Genomics Resources

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Protein Alignment sano and GAREM1

DIOPT Version :10

Sequence 1:NP_001286595.1 Gene:sano / 37185 FlyBaseID:FBgn0034408 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_001229338.1 Gene:GAREM1 / 64762 HGNCID:26136 Length:876 Species:Homo sapiens


Alignment Length:861 Identity:172/861 - (19%)
Similarity:275/861 - (31%) Gaps:302/861 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LPAVAKIIKGQ-------------HQALGVPTLSAPSLQSTALFLSAGKKYQILAQPIKIKEGRK 215
            ||.:|::..|:             |......|::|.||:                      ||..
Human    32 LPQIARLDNGECVEGLRENDYLLIHSCRQWTTITAHSLE----------------------EGHY 74

  Fly   216 PTNVGAKVLIPETYGGYFELLSED---GRSTRCIDSVLELSRRRNARVLVRE--TF-------RC 268
            .  :|.|:.||..|.|.|:||.:|   ....:..:||.|:::....||.|.|  ||       .|
Human    75 V--IGPKIEIPVHYAGQFKLLEQDRDIKEPVQYFNSVEEVAKAFPERVYVMEDITFNVKVASGEC 137

  Fly   269 QQ----MNRTIHAGELLTTMND--------------------------------NGKY--LQCRN 295
            .:    .|.|:..|:.||.|..                                .||.  |.|.|
Human   138 NEDTEVYNITLCTGDELTLMGQAEILYAKTFKEKSRLNTIFKKIGKLNSISKLGKGKMPCLICMN 202

  Fly   296 IK-DEIINLPLDTKAKF---SPIAREDSISGVHTVKNLLLK-RMPVIVRLVHGSAP--------- 346
            .: :|.|:||...|.:|   ||:..:.. .|.||::|::.| |:||.|.:  .|.|         
Human   203 HRTNESISLPFQCKGRFSTRSPLELQMQ-EGEHTIRNIVEKTRLPVNVTV--PSPPPRNPYDLHF 264

  Fly   347 --KGLKQPFVPELRLLGCVEIDRIFALPLQKDTDLVPV--PLNAKI-KLQRAKNM-------EQL 399
              :|.:..||.       ::...:....:.::..::|:  ||:..: |....:::       |.|
Human   265 IREGHRYKFVN-------IQTKTVVVCCVLRNNKILPMHFPLHLTVPKFSLPEHLVKGESWPETL 322

  Fly   400 EH-----------FIEYSRFL----------------------DKAQRLLADARDRLQIVDLKLS 431
            .|           ..||||.:                      :.....|:.|||.|.....:||
Human   323 VHHWLGICQEQFDIDEYSRAVRDVKTDWNEECKSPKKGRCSGHNHVPNSLSYARDELTQSFHRLS 387

  Fly   432 -----EKEKKDSKFNSRN----GG---RLPVVMLPSAAGMASGLAESGYVLRKSASCDSWSKQQQ 484
                 .....:|:.|...    ||   ..|..:||.   ..||.:.|.|:..::      |::..
Human   388 VCVYGNNLHGNSEVNLHGCRDLGGDWAPFPHDILPY---QDSGDSGSDYLFPEA------SEESA 443

  Fly   485 QALSSSEIAEEYNEIDHIYDYVRGLTPLSKGLARFEPICESPTLRSHHTDSGSGNYCSLIRAPVH 549
            .....||:  .|.|:           .|.:|....:|:..|.:.:         |.|...|..|.
Human   444 GIPGKSEL--PYEEL-----------WLEEGKPSHQPLTRSLSEK---------NRCDQFRGSVR 486

  Fly   550 QQATTSGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHVVNHYHHGHIQEDIKPVPPPIET----- 609
            .:..||......:|.:...||......|                        ||||..|.     
Human   487 SKCATSPLPIPGTLGAAVKSSDTALPPP------------------------PVPPKSEAVREEC 527

  Fly   610 -------IPGKKPAEKRQRPTLPKLYIKNAHSAGSSSNGNSTGTTHSTSHSHSHSHSHVHSHSHG 667
                   :|.:........|::|...:|.|..           .|.|.|.:.|:..|.:|:.|..
Human   528 RLLNAPPVPPRSAKPLSTSPSIPPRTVKPARQ-----------QTRSPSPTLSYYSSGLHNISVT 581

  Fly   668 QSQSQQQPPTP----------------NGNTGNAVANAAASAVAAAHHGSHGSHG---SHLHPHP 713
            ::.:.....||                ....|:..|.|.:|.::..:|.|..|..   |.....|
Human   582 KTDTNPSESTPVSCYPCNRVKTDSVDLKSPFGSPSAEAVSSRLSWPNHYSGASESQTRSDFLLDP 646

  Fly   714 HASVHPHPHPHHGKVLTPNNHLPSK------EAL-EPQSPLFHIRYKSLSSLQLTPDNNNC-SSV 770
            ..|   :.:|......||..:.|:.      |.| .|.||:         :.:.:...:.| .|.
Human   647 SRS---YSYPRQKTPGTPKRNCPAPFDFDGCELLASPTSPV---------TAEFSSSVSGCPKSA 699

  Fly   771 TPPTISAHGKSSGAGVGSGATASGTPGTPGTPPDVGLKCGSILNVHGYLSSPHPLPLPLPHSRSS 835
            :....|...||..|||...:|:  .|..|...|.        |......|...||||.:      
Human   700 SYSLESTDVKSLAAGVTKQSTS--CPALPPRAPK--------LVEEKVASETSPLPLKI------ 748

  Fly   836 SSNNHHNPREGTLDSS 851
             .....:|:.|:.|.|
Human   749 -DGAEEDPKSGSPDLS 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanoNP_001286595.1 CABIT 164..400 CDD:463686 69/324 (21%)
GAREM1NP_001229338.1 CABIT 12..320 68/321 (21%)
CABIT 32..323 CDD:463686 69/324 (21%)
PHA03307 414..>766 CDD:223039 86/445 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 496..572 18/110 (16%)
Necessary for interaction with GRB2. /evidence=ECO:0000269|PubMed:19509291 498..550 11/75 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 626..664 9/40 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 738..763 8/31 (26%)
SAM_GAREM 808..874 CDD:188924
Blue background indicates that the domain is not in the aligned region.

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