DRSC/TRiP Functional Genomics Resources

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Protein Alignment sano and Garem2

DIOPT Version :10

Sequence 1:NP_001286595.1 Gene:sano / 37185 FlyBaseID:FBgn0034408 Length:911 Species:Drosophila melanogaster
Sequence 2:NP_001161351.1 Gene:Garem2 / 242915 MGIID:2685290 Length:880 Species:Mus musculus


Alignment Length:430 Identity:86/430 - (20%)
Similarity:144/430 - (33%) Gaps:160/430 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  2767 FNCNIPDNASIDTI---------FRTL---GEGHYNVKRGFSIEVRKLVKRIVPLTRVL------ 2813
            :||::....|.|..         |..|   |.|.|.|.:|.:....|::::| |:..:.      
Mouse   202 YNCDLHFKVSRDRYSASSLTMESFAYLWAGGRGSYGVDKGKACFEMKVIEKI-PVKHISSKGIED 265

  Fly  2814 ------WQRTRNQLLPTPAKFHYIFSLRDLSRIWQGMIGTLSTVITSEAVLILLWKNECTRVFAD 2872
                  |....:..|.....:.|.||              ::...||.||               
Mouse   266 HDVLVGWSLANSSYLLGEEAYSYAFS--------------MTAKKTSNAV--------------- 301

  Fly  2873 RFVVPGDLDWFINEMLTVLEEDLGPEYRE--MAGPSPVFVDFMRDAPEPTGEEGEEADMELPKVY 2935
                               .||.|..:.|  :.|   .|::|          :|.|.::...|..
Mouse   302 -------------------TEDYGETFDENDVVG---CFINF----------DGAEVEISFSKNG 334

  Fly  2936 EPV-SCFNVLRERLK---MF--------LVQFNEMIRGTG-MDLVFF--PD--AMLHLVKISRII 2983
            |.: ..|.|.::.||   :|        .|:||     .| .:..||  ||  .:|..:.:...|
Mouse   335 EDLGKAFTVSKDELKGKPLFPHVLCHNCAVEFN-----FGQQESPFFAQPDGFTLLQQIPVHDRI 394

  Fly  2984 RHPRGN--------VMLVGVGGSGK-QSLTKLASFIAGYKTFQISLTRSYNVA---NFLEDLKLL 3036
            |.|:|.        :::||:.|||| :.:||......|          .||:.   ..||  |::
Mouse   395 RGPKGPENKKDCEVIVVVGLPGSGKTEWVTKHTEANPG----------KYNILGTDTILE--KMM 447

  Fly  3037 YRSCGVQGKGTTFLFTDMDVKEEGFLEYLNNILSSGVISNLFNRDEQTEIVSELTPTMKRENQKK 3101
            ..:...|.|..|.|. ::.::...||         |....:..|.::..|:.:...:.....:| 
Mouse   448 ISTLKRQMKDVTKLL-EISLRAPLFL---------GKFIEIAARKKRNYILDQTNVSASARKRK- 501

  Fly  3102 NVTQETVMEYF--LQRVCHHLHVVFCFSPVGETFRRRIMR 3139
                   |..|  .||..    ||.|  |..|.:::|.::
Mouse   502 -------MCLFAGFQRKA----VVVC--PTDEEYKKRTLK 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanoNP_001286595.1 CABIT 164..400 CDD:463686
Garem2NP_001161351.1 CABIT 12..320 29/169 (17%)
CABIT 29..338 CDD:463686 34/197 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..407 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..483 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 527..548 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 569..611
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 633..713
SAM_GAREM 812..878 CDD:188924
Blue background indicates that the domain is not in the aligned region.

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