DRSC/TRiP Functional Genomics Resources

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Protein Alignment sano and gareml

DIOPT Version :9

Sequence 1:NP_001286595.1 Gene:sano / 37185 FlyBaseID:FBgn0034408 Length:911 Species:Drosophila melanogaster
Sequence 2:XP_002665828.1 Gene:gareml / 100331995 ZFINID:ZDB-GENE-081031-49 Length:810 Species:Danio rerio


Alignment Length:808 Identity:160/808 - (19%)
Similarity:264/808 - (32%) Gaps:257/808 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 SKQPLPAVAKIIKGQHQALGVPTLSAPSLQSTALFLSAGKKYQILAQPIKIKEGRKPTNVGAKVL 224
            ||..||.:.::..|::    |..||    :...:.|.:.:::..:... .::||...  :|.|:.
Zfish    25 SKFRLPTLVRLSNGEN----VEGLS----EEDVILLHSCRQWTTVTAH-SLEEGHYV--IGPKID 78

  Fly   225 IPETYGGYFELLSEDGRSTR----CIDSVLELSRRRNARVLVRE--TFRCQQM-----------N 272
            ||..|.|.|:||.:| |..|    ...||.|::.....||.|.|  ||..:.:           |
Zfish    79 IPLQYQGKFKLLDQD-RDVREPVQYFGSVEEIAGVFPDRVFVMEPITFSVKVVSGEFTEDSELYN 142

  Fly   273 RTIHAGELLTTMNDN---------------------GK--------------YLQCRNIK-DEII 301
            .::.||:.||.|...                     ||              .|.|.|.: :|.:
Zfish   143 FSLQAGDELTLMGQAELLCVQSTREKSRLTALLRRLGKAGGALGRPARTKMPCLICMNHRTNESV 207

  Fly   302 NLPLDTKAKFSPIARED--SISGVHTVKNLLLK-RMPVIVRLVHGSAPKGLKQPFVP-------- 355
            :||...:.:|...:.::  ...|.|||::::.: |:||.|     |.|.  :.|..|        
Zfish   208 SLPFQCRGRFCTRSLQELQMQGGEHTVRSIIERVRLPVNV-----SVPS--RPPRNPYDLHAIRE 265

  Fly   356 --ELRLLGCVEIDRIFALPLQKDTDLVPVPLNAKIKLQRAKNMEQLEHFI---EYSRFLDKAQRL 415
              ..:||..:....:....|:|: :::|                  .||:   :..||......|
Zfish   266 GHRYKLLSIISKTVVLCCILRKE-EVMP------------------SHFLLLTDMPRFTLPEGLL 311

  Fly   416 LADARDRLQIVDLKLSEKEKKDSKFNSR--------------NGGRLPVVMLPSAAGMASGLAES 466
            .|||..:..::...|..:|..|:...||              :..|:.|.:      ...|..|.
Zfish   312 RADAPYQQVVLQCALRCQESFDADDYSRAVREVKTDFSEECLSPRRIRVCV------QGYGRDEL 370

  Fly   467 GYVLRKSASCDSWSKQQQQALSSSEIAEEY--NEIDHIYDYVRGLTPLSKGLARFEPICESPTLR 529
            |..|::.:.|                  .|  ..:.|.:....|..         :.:.:|.||.
Zfish   371 GTSLQRLSLC------------------VYGGGAVTHTHTISHGCR---------DSLVDSHTLP 408

  Fly   530 SHHTDSGSGNYCSLIRAPVHQQATTSGNNNYSSLESNKHSSSGGGHHPGSHHHHHHHV------- 587
            |...|.....|.:      ...:|.|....|..|.:|:.|.|.|.....:....|:.:       
Zfish   409 SSDGDGEEREYVT------PDWSTESQEIPYEELWTNQTSGSFGVTSESAVKAEHNLISFHSTTT 467

  Fly   588 -----VNHYHHGHIQEDIKPVP----PPIETIPGKKPAEKRQ-------------------RPTL 624
                 |...|...:|.|...||    ||  .:|.|..|.|.:                   .|.:
Zfish   468 SLDGTVGSTHIAMVQMDAGRVPRVSTPP--PVPPKSEAVKEECRFLNAPPVPPRCAKGPTPSPPV 530

  Fly   625 PKLYIKNAHSAGSSSNGN--STGTTHSTSHSHSHSHSHVHSHS---------------HGQSQSQ 672
            |..:.|...:...:.|.:  |:|.|.|::.....|.....|:|               ...:...
Zfish   531 PARFPKTPPTQTLNPNLSFYSSGLTESSAPRSGSSSPSPDSYSLYCYPCTWADCVTSDTCVTPDS 595

  Fly   673 QQPPT-----PNGNTGNAVANAAASAVAAAHHGSHGSHGSHLHPHPHA--------SVHPHPHPH 724
            .||..     |.|  |.|..:...:....:...:..::.:...|.|.|        :::|..:|.
Zfish   596 TQPAQACWSHPRG--GGAYTSNILNTPLLSTDSTQKNYSTCPRPRPVAQNRFAPFGALNPFANPG 658

  Fly   725 HGKV----LTPNNHLPS----------KEALEPQSPLFHIRYKSLSSLQLTPDNNNCSSVTPPTI 775
            |...    ||.....|:          ||....|..|     ||.....|.|..::..:||..| 
Zfish   659 HTHASSDWLTTGRDSPTLIPDLISSTPKETQANQGAL-----KSSPEPLLKPVKSSEDTVTIDT- 717

  Fly   776 SAHGKSSGAGVGSGATASGTPGTPGTPP 803
                 :||. |.....|.|..|:|..||
Zfish   718 -----ASGL-VAMERGAEGGAGSPWRPP 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sanoNP_001286595.1 CABIT 164..400 CDD:289505 62/301 (21%)
garemlXP_002665828.1 CABIT 29..321 CDD:289505 70/329 (21%)
GAT_1 <63..122 CDD:294025 20/62 (32%)
SAM_GAREM 742..808 CDD:188924
SAM 746..807 CDD:197735
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR14454
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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