DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jheh3 and ppme1

DIOPT Version :9

Sequence 1:NP_611387.1 Gene:Jheh3 / 37182 FlyBaseID:FBgn0034406 Length:468 Species:Drosophila melanogaster
Sequence 2:XP_002942566.1 Gene:ppme1 / 100495664 XenbaseID:XB-GENE-979838 Length:388 Species:Xenopus tropicalis


Alignment Length:378 Identity:77/378 - (20%)
Similarity:126/378 - (33%) Gaps:112/378 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 SEEAKEKKHVY-------PLLLLHGWPGSVREFFDFIPMLTKHSNITDYAFEVVAPSLVGYGWSD 202
            ||..|:...||       .||||||...|...:..|...:|.....     .|||....|:|.:.
 Frog    58 SETGKDSFRVYRSGSEGPVLLLLHGGGHSALSWAVFTTAITSRIRC-----RVVALDQRGHGETK 117

  Fly   203 AATRPGFNAAEMATVMRNL-----------MLRLGHKKFFIQGGDWGSIIGSNLATLYPENVIGY 256
            .......:|..||..:.|:           ::.:||.    .||  ...:.:..|.|.| :::| 
 Frog   118 VKNPEDLSAETMARDIGNVVEALYGDLPPPIMLIGHS----MGG--AIAVHTAAANLVP-SLLG- 174

  Fly   257 HSNMCVLH----TPLAILKGIYGSFFPEKYLPSRFFVDHHFPVWEKWLELLEESGYF-HIQATKP 316
               :||:.    |.:..|..:      :.:|.||   ...|...|..:|...:||.. ::::.:.
 Frog   175 ---LCVIDVVEGTAMDALNSM------QNFLRSR---PKTFKSLENAIEWSVKSGQIRNLESARV 227

  Fly   317 DTIG-------AALTSSPVGLASYILEKFQ----------TCTNPGLKQDFGAIVTVFGLEAVLD 364
            ...|       |:....|..:...|:|:.:          ...|...|:|               
 Frog   228 SMAGQIKQCEEASTPEGPKAIVEGIIEEEEEEEDEEENGGQSINKRKKED--------------- 277

  Fly   365 NLMVYYLTNSATTAARFYLENV--SKT-------YRDLQLDRVQSPVP-----MGCARFRFDLAS 415
                    ::.|...|.|...:  |||       :|.|....:..|:|     .|..|...||  
 Frog   278 --------DTETKKERPYTWRIELSKTEKYWEGWFRGLSNLFLSCPIPKQLLLAGVDRLDKDL-- 332

  Fly   416 VTDWQLRDKF-----PNLTHSMYFQQGSHFAALEMPAMLFNDFTAFVGKIGLH 463
             |..|::.||     |...|:::.......|......::.:.|...||  |.|
 Frog   333 -TIGQMQGKFQMQVLPQCGHAVHEDAPDKVAEAVATFLVRHRFAESVG--GFH 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Jheh3NP_611387.1 EHN 60..165 CDD:283978 11/26 (42%)
Abhydrolase 135..>251 CDD:304388 29/123 (24%)
ppme1XP_002942566.1 MhpC 64..372 CDD:223669 69/358 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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