DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18190 and ebp-1

DIOPT Version :9

Sequence 1:NP_611384.2 Gene:CG18190 / 37179 FlyBaseID:FBgn0034403 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_507526.1 Gene:ebp-1 / 3565059 WormBaseID:WBGene00013344 Length:316 Species:Caenorhabditis elegans


Alignment Length:317 Identity:98/317 - (30%)
Similarity:147/317 - (46%) Gaps:93/317 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTVALTSVNAENMSRHDMLQWVNNMVHGHFKKIEELCSGAAYCQMMEMIFPNCINLKRVKMTAKL 70
            :.|..|:.:|:|:|||:||.|||:.:..||.|||:|.:||.||...:.:||:.|.||:||..::|
 Worm     6 VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVKWNSRL 70

  Fly    71 EHEYLHNLRLFQEAFNRLKLDKTVPIDRLIKGRFQDNFEFLQWFKKFFDSQAPGLE--------- 126
            |.::|.|.:|.|..:..|.::|.:|:|:||||:|||||||||||||.||:...|.|         
 Worm    71 ELDWLSNWKLVQTTWKNLGVEKVIPVDKLIKGKFQDNFEFLQWFKKLFDANYDGHEYDPMQARNG 135

  Fly   127 --------------------------------NIKSLANAPLAKPIKP---RQFAKERS------ 150
                                            .:::.|..|.|.|.:|   |..|..|:      
 Worm   136 EGLPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAPTPT 200

  Fly   151 ---------PVN------------------ANDDALKELIDEMKNLSLKREDI---MEASNQIY- 184
                     ||.                  |..:.|||.::|:.....:.:::   :|.....| 
 Worm   201 AAPPKTCAPPVRSASTVAAAAAAAPPGVDMATFNKLKEELEEVTRQLTESDNVIASLEKERDFYF 265

  Fly   185 NKLRLVEDLV--NDMINNNQLVELCKRIQAVLYKTIDGEINEEPVEVNEDNGDEGAE 239
            :|||.:|.:.  |:.|.|   ||: .|:..|||:|      ||.....||..:.|||
 Worm   266 SKLRTIEVICQDNESIGN---VEV-NRVLEVLYET------EEGFAPPEDEANGGAE 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18190NP_611384.2 CH 19..>92 CDD:278723 32/72 (44%)
EB1 184..216 CDD:281288 13/34 (38%)
ebp-1NP_507526.1 BIM1 19..308 CDD:227542 91/298 (31%)
CH 19..117 CDD:294029 51/97 (53%)
EB1 258..295 CDD:281288 14/40 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166343
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5217
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1237523at2759
OrthoFinder 1 1.000 - - FOG0000490
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10623
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X303
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.850

Return to query results.
Submit another query.