DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18190 and Mapre3

DIOPT Version :10

Sequence 1:NP_611384.2 Gene:CG18190 / 37179 FlyBaseID:FBgn0034403 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001007657.1 Gene:Mapre3 / 298848 RGDID:1359297 Length:281 Species:Rattus norvegicus


Alignment Length:283 Identity:98/283 - (34%)
Similarity:151/283 - (53%) Gaps:48/283 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKLTVALTSVNAENMSRHDMLQWVNNMVHGHFKKIEELCSGAAYCQMMEMIFPNCINLKRVKMTA 68
            :.:.|..|||.:||:||||||.|||:.:|.::.|||:|||||||||.|:|:||.|::|::||..|
  Rat     1 MAVNVYSTSVTSENLSRHDMLAWVNDSLHLNYTKIEQLCSGAAYCQFMDMLFPGCVHLRKVKFQA 65

  Fly    69 KLEHEYLHNLRLFQEAFNRLKLDKTVPIDRLIKGRFQDNFEFLQWFKKFFDSQAPGLENIKSLAN 133
            ||||||:||.::.|.||.::.:||.:|:::|:||:|||||||:||||||||:...|.:....||.
  Rat    66 KLEHEYIHNFKVLQAAFKKMGVDKIIPVEKLVKGKFQDNFEFIQWFKKFFDANYDGKDYNPLLAR 130

  Fly   134 -----APLAKP------------------------------------IKPRQFAKERSPVNAN-- 155
                 ||...|                                    :.|....::..|...|  
  Rat   131 QGQDVAPPPNPGDQIFNKSKKLIGTAVPQRTSPTGPKNMQTSGRLSNVAPPCILRKNPPSARNGG 195

  Fly   156 ---DDALKELIDEMKNLSLKREDIMEASNQIYNKLRLVEDLVNDMINNNQLVELCKRIQAVLYKT 217
               |..:.||..::.:|.|..:.:.:..:..::|||.:|.:..:..:.|..|  ...|..:||.|
  Rat   196 HEADAQILELNQQLLDLKLTVDGLEKERDFYFSKLRDIELICQEHESENSPV--ISGIIGILYAT 258

  Fly   218 IDGEINEEPVEVNEDNGDEGAEH 240
            .:|....|..|:.|...::..|:
  Rat   259 EEGFAPPEDDEIEEHQQEDQDEY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18190NP_611384.2 BIM1 19..>124 CDD:227542 63/104 (61%)
EB1 184..216 CDD:460870 8/31 (26%)
Mapre3NP_001007657.1 BIM1 16..279 CDD:227542 91/264 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 157..181 0/23 (0%)
DCTN1-binding. /evidence=ECO:0000250 217..281 14/65 (22%)
APC-binding. /evidence=ECO:0000250 217..260 10/44 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..281 4/20 (20%)

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