DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15084 and AT1G25988

DIOPT Version :10

Sequence 1:NP_611383.1 Gene:CG15084 / 37178 FlyBaseID:FBgn0034402 Length:316 Species:Drosophila melanogaster
Sequence 2:NP_173933.1 Gene:AT1G25988 / 839149 AraportID:AT1G25988 Length:180 Species:Arabidopsis thaliana


Alignment Length:165 Identity:40/165 - (24%)
Similarity:73/165 - (44%) Gaps:27/165 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 HFEIQTDPGNLDYVILSGARRQENRWDPLQNEQVVPETKEVQKRLFDDAMYKLEHQAKDAKAGAD 160
            :|..:|||.|.:|||.|||:::...:: .::.:.:..|.|.:|....|..|:||||..|.:....
plant    23 NFGHKTDPQNCEYVITSGAQKKVEEYE-AEDAETMELTAEQEKGKLADPFYRLEHQEVDLQKKKA 86

  Fly   161 ARPV---LQKLVERNMSVWDDSYMANSRLRAEFRQQKKEINGQQELDRQLLAKSSL-----DIAL 217
            |.|.   ||::.:...:  |.:....||.|..|::.:            |..||..     .|..
plant    87 AEPFLVRLQRVSDARHA--DGTQKTCSRRRGCFKEAR------------LGEKSDFFERVKKILR 137

  Fly   218 LPETTQDREMAALMKLQTKSALERESEQRLELLMR 252
            ||:|.    :..:::.:...|..:|.|....:.::
plant   138 LPQTL----LGVIIEQEKNGAGRKEKENNRSISIK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15084NP_611383.1 Saf4_Yju2 9..311 CDD:461333 40/165 (24%)
AT1G25988NP_173933.1 Saf4_Yju2 <27..>104 CDD:461333 24/79 (30%)

Return to query results.
Submit another query.