DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and AT3G59980

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_191557.1 Gene:AT3G59980 / 825168 AraportID:AT3G59980 Length:273 Species:Arabidopsis thaliana


Alignment Length:210 Identity:44/210 - (20%)
Similarity:75/210 - (35%) Gaps:57/210 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   819 AHSQISAADLEKAVQAQADK--VRE------LKASTKDKAIWQPEVTKLLDLKK-QLEEAKKKTA 874
            |.:.:||.:.||..::|.::  |:|      :|.....|| ||.|....|.::: .:.||:.:..
plant    80 AGTTVSADESEKKSESQKEEENVKETANLLDIKVGRIVKA-WQHEEADSLYVEEVDIGEAEPRII 143

  Fly   875 TAAAPAATP---------------APSN--GSQSVQDLEKAIQEQGDKVRKL---KGSTKDKTVW 919
            .:......|               .|.|  |.:|...|..|.....:.|..|   :||.....||
plant   144 CSGLVKYVPLDLLQGASVVVLANLKPRNMRGVKSCGMLLAASDAAHENVELLVPPEGSVPGDRVW 208

  Fly   920 -----------QPEVNILLDLKKQLEAVQKAAKAAPAANAAPAASPAATADAAKVKALEDKIAQQ 973
                       :|.....:..||..|.||                |....||:.|..|::.:.:.
plant   209 FGNEEDLEQLPEPAPPNKVQKKKMWELVQ----------------PLLKTDASGVSMLKEHLMRT 257

  Fly   974 AEKVRTLKATGDAAV 988
            :..:.|.|:..:|.:
plant   258 SSGLVTSKSLRNANI 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 9/38 (24%)
MetRS_RNA 895..938 CDD:238475 13/56 (23%)
MetRS_RNA 966..1009 CDD:238475 4/23 (17%)
AT3G59980NP_191557.1 tRNA_bind_EMAP-II_like 104..208 CDD:239198 21/104 (20%)
Blue background indicates that the domain is not in the aligned region.

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