DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and Y105E8A.28

DIOPT Version :9

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_001364633.1 Gene:Y105E8A.28 / 3565614 WormBaseID:WBGene00013685 Length:225 Species:Caenorhabditis elegans


Alignment Length:99 Identity:25/99 - (25%)
Similarity:44/99 - (44%) Gaps:22/99 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 LVKKLDDKLKATPYLAGDKPSAADIAIWSLLAPDGTLKGAQ-----NVDNLR--DWYGRVKALPE 166
            |:::|.|.|...|         .|..:...||..|.:..||     |:.:||  :.:...:|:|.
 Worm    11 LLRQLSDLLAEFP---------NDDLLGRALARLGIVGIAQQNVVANIRHLRNEELHRFRQAVPP 66

  Fly   167 VQEVLAEQPLKDLSFNALQQSNRYGGLHHVPLKR 200
            .|:....:...|::.|.::| ||.|     |::|
 Worm    67 PQQAEEAEEEADVAENVVEQ-NRLG-----PIRR 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GstA 1..175 CDD:223698 17/72 (24%)
GST_N_family 1..65 CDD:238319
GST_C_family 63..164 CDD:295467 14/61 (23%)
PRK12268 254..812 CDD:237029
MetRS_core 255..625 CDD:173907
Anticodon_Ia_Met 634..763 CDD:153411
MetRS_RNA 828..868 CDD:238475
MetRS_RNA 895..938 CDD:238475
MetRS_RNA 966..1009 CDD:238475
Y105E8A.28NP_001364633.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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