DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and LeuRS

DIOPT Version :9

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_001285589.1 Gene:LeuRS / 326262 FlyBaseID:FBgn0284253 Length:1182 Species:Drosophila melanogaster


Alignment Length:1203 Identity:216/1203 - (17%)
Similarity:382/1203 - (31%) Gaps:471/1203 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AKQPVQV-QLVNLNDAKYKDLLVLPTLELDNGLRLFSPAAIAKYLFVGKGQQRDEWLEWSATLLA 85
            ||...|: |.:.|.|.:.||.     ...::.|..|.|.|:.....:|      ..::|..|.:.
  Fly   155 AKYQWQIMQSLGLKDEEIKDF-----ANAEHWLNYFPPLAVQDLKRIG------VHVDWRRTFIT 208

  Fly    86 PALAHHMAVGHKADANALPVLNALVKKLDDKLK------------------ATPYLAGDKPSAAD 132
                        .|||  |..::.|:...:.||                  ..|.:..|:.|...
  Fly   209 ------------TDAN--PYFDSFVRWQFNHLKERGKIMYGKRYTIYSPKDGQPCMDHDRSSGEG 259

  Fly   133 IA---------------------------IWSLLAPDGTLKGAQNV--------------DNLRD 156
            :.                           :.:.|.|: |:.|..|.              .|...
  Fly   260 VGPQEYTLIKMKVLEVPKALSSIKQPIFMVAATLRPE-TMYGQTNCWLHPDIKYIAWQANKNNEV 323

  Fly   157 WY------------------GRVKALPEV--QEVLA---EQPLKDLSFNALQQSNRYGGLHHVPL 198
            |.                  |.:|.|.||  |::|.   ..||           .::..::.:|:
  Fly   324 WVSTRRAARNMTYQGFTAVEGEIKVLAEVTGQDLLGVPLSAPL-----------TKHKVVYSLPM 377

  Fly   199 KRLSLADASKLLVDTTPTVADTVTNEEISAAKAAFTYTAPKEIKEERTVLPKPGERNVLITSALP 263
              ||:.:      |....|..:|.::      :...|.|..:::::.....|.|.::.::   ||
  Fly   378 --LSIKE------DKGTGVVTSVPSD------SPDDYAALVDLQKKEAFRQKYGLKDEMV---LP 425

  Fly   264 Y----VNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAENLTPREICD 324
            |    :..||.||.     ||| ::|       |.||.|      .:..:...|||   .:|:| 
  Fly   426 YEPIPIIEVPTLGK-----LSA-VHA-------YETLKI------QSQNDKDKLAE---AKEMC- 467

  Fly   325 KYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGY-------IITESVEQLLCQKC 382
             |.:   :.|....:...:.||.....:.|: |:...|..:|..       |::.|.::.:...|
  Fly   468 -YLK---SFYDGVMLVGAFAGRKIQDVKKDL-QKRLVDANEADVYYEPEKTIMSRSADECVVALC 527

  Fly   383 DRFL-----------ADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSAPVL 436
            :::.           |.:.:.|.    ...:|:|| :..:.|...::.        ..|:....|
  Fly   528 NQWYLNYGEPEWQAQATKILHGM----ETFHEEAR-NNFEACLNWLHE--------YACSRTYGL 579

  Fly   437 RSSDQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKE----------------------- 478
            .:.      ||        |.||               ||.|                       
  Fly   580 GTK------LP--------WDDK---------------WLIESLSDSTIYMAFYTVVHLLQGGTF 615

  Fly   479 --------GLKPRCITRDLKWGIPVPHEGFEKKVFYVWF-DAPFGYVSMTKR-----YTKEYQQW 529
                    |:||..:|.:: |.             |::| :.|....:..|:     ..:|::.|
  Fly   616 RGEKPGPFGIKPSDMTGEI-WD-------------YIFFKETPLPKKTAIKQEHLAVLRREFEYW 666

  Fly   530 WQ---PAKGTDVELFQFMAKDNVPF----HSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFS 587
            :.   ...|.|      :.::::.|    |:.:||:......||..:..|::    ||  ..|.|
  Fly   667 YPMDLRVSGKD------LIQNHLTFCLYNHAAIWPNDENKWPKGMRVNGHLL----LN--SAKMS 719

  Fly   588 KSRGIGVFGNDAQETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVF 652
            ||.|..:...:|.:. ..||..|..||.|....:|::|          .|...:.|  :.|...|
  Fly   720 KSDGNFLTLTEAVDK-FSADGMRLCLADAGDSVEDANF----------VESTADAG--ILRLYTF 771

  Fly   653 CE------KNFSSTVPGVITTQDELVLLALINRELR----GYINSMEKAKLRDGVRHL-LAISRH 706
            .|      :|.||...|...|.::.|.|:.:|.:.:    .|...:.|..||.|...| ||..::
  Fly   772 IEWVKEMLENRSSLRKGTDKTFNDQVFLSELNLKTQQTDENYRKMLFKEALRSGFYELQLARDKY 836

  Fly   707 -----GNGYMQSQQPWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAK 766
                 .||..:.                      |.:......|.|:.|..|..|..::|.|..|
  Fly   837 RELCGANGMHED----------------------LVLEFIRRQALLVSPICPHMAEHVWGLLGNK 879

  Fly   767 QTPLNAEKPLV-----------TLLLPAGH------------------------QIGKP------ 790
            ::.::|..|.|           ..|:.|.|                        |..||      
  Fly   880 ESIVHARWPEVGAINEVDILCSEYLMEAAHSFRLNLKNLLQIKGKAGKDKSVNVQAAKPNRGLVW 944

  Fly   791 -APLFAKLEQSFIDELKGKYGGAQATNDAAHSQISAADLE---------KAVQAQADKVRELKAS 845
             |..:...:...:|.:|..:..:||..|   :::.||.|:         |.|...|..:||...|
  Fly   945 VAKTYPPWQCCVLDTMKELFNKSQALPD---NKVIAATLQQKAELKKFMKRVMPFAQMIREKVES 1006

  Fly   846 TKDKAIW---------QPEVTKLLDLKKQLE------------EAKKKTATAAAPAA-----TPA 884
            .|..|..         |..::.|..||..|:            .|.:||.....|.:     :.|
  Fly  1007 GKGVAALAVTLEFDERQVLISNLEYLKNTLDLDVLEIKYTDDPSAPEKTREEVRPGSPFISFSVA 1071

  Fly   885 PSNGSQSVQDLEKA--------------IQEQGDKVRKLKGSTKDKT---VWQ------------ 920
            |:...:....:|::              :|...:|:.|:.|...|..   :|:            
  Fly  1072 PNVSVELTNPIERSSLFQVNTVISEGDTVQSLREKLSKIIGLKTDAATLKIWRYEDPVLGPRKIP 1136

  Fly   921 ------------PEVNILLDLKKQLEAVQKAAK 941
                        .|.|.:||::.:..::::|.|
  Fly  1137 NFEDYKAGKSVLGEGNFVLDVENKKVSLEQAGK 1169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GstA 1..175 CDD:223698 39/235 (17%)
GST_N_family 1..65 CDD:238319 12/43 (28%)
GST_C_family 63..164 CDD:295467 22/177 (12%)
PRK12268 254..812 CDD:237029 127/681 (19%)
MetRS_core 255..625 CDD:173907 82/435 (19%)
Anticodon_Ia_Met 634..763 CDD:153411 30/144 (21%)
MetRS_RNA 828..868 CDD:238475 14/69 (20%)
MetRS_RNA 895..938 CDD:238475 11/83 (13%)
MetRS_RNA 966..1009 CDD:238475
LeuRSNP_001285589.1 PLN02959 1..1068 CDD:215518 201/1100 (18%)
nt_trans 47..>204 CDD:294020 14/59 (24%)
LeuRS_core <525..758 CDD:173906 53/311 (17%)
Anticodon_Ia_Leu_AEc 756..876 CDD:153413 31/153 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446762
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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