DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15097 and SKIP6

DIOPT Version :9

Sequence 1:NP_001261079.1 Gene:CG15097 / 37172 FlyBaseID:FBgn0034396 Length:743 Species:Drosophila melanogaster
Sequence 2:NP_565522.1 Gene:SKIP6 / 816731 AraportID:AT2G21950 Length:372 Species:Arabidopsis thaliana


Alignment Length:232 Identity:61/232 - (26%)
Similarity:91/232 - (39%) Gaps:44/232 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 SCPAMS-TRRRYCRLAVLENCIYSLGGFDSTNYQSSVERFDPRVGRWQPVPSMSARRSSCGVAST 508
            |||:.| ....|   .|:::.||.:||.......|||...|.|...|:.|.:|...|........
plant   110 SCPSPSLVGSAY---VVVDSEIYVIGGSIRDVPSSSVWVLDCRFHTWRRVSNMRVGREFAAAGVI 171

  Fly   509 DGHLYCIGG---NDGTMCMSSGERFSLRRNSWEPIAA--MHSRRS-THEVVEVEGALFALGGNDG 567
            ||.:|.|||   ::....::..|.|.::..:|||:|:  |..|.. .|....:||.::|:...:|
plant   172 DGKIYVIGGCVVDNWARSINWAEMFDIKTQTWEPVASPGMEVREKWMHASAVMEGKVYAMADRNG 236

  Fly   568 SSSLNSVERYDTRLNKWSVVNAMVARRSSVG----AAVLE----CFHLERGLVQTTNLXPLASI- 623
            ..       |:.:..||.    |..:|..:|    |.|:|    |:..   |.:.... |...| 
plant   237 VV-------YEPKEKKWE----MPEKRLDLGWRGRACVIENILYCYDY---LGKIRGYDPKERIW 287

  Fly   624 -----TES---FAAAAASGTSNGNSTI---NGIGSGG 649
                 .||   |...|......|..|:   ...||||
plant   288 RELKGVESLPKFLCGATMANRGGKLTVLWEGKAGSGG 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15097NP_001261079.1 BTB 63..166 CDD:279045
PHA03098 65..539 CDD:222983 28/97 (29%)
BACK 174..276 CDD:285009
Kelch 324..369 CDD:128874
KELCH repeat 359..402 CDD:276965
Kelch 370..415 CDD:128874
KELCH repeat 406..450 CDD:276965 3/4 (75%)
Kelch 417..463 CDD:128874 6/18 (33%)
KELCH repeat 453..496 CDD:276965 13/42 (31%)
Kelch 464..510 CDD:128874 13/45 (29%)
Kelch_1 499..543 CDD:279660 13/48 (27%)
KELCH repeat 500..545 CDD:276965 14/49 (29%)
KELCH repeat 547..590 CDD:276965 8/43 (19%)
Kelch 559..603 CDD:128874 10/47 (21%)
SKIP6NP_565522.1 F-box 21..64 CDD:279040
Kelch_1 117..160 CDD:279660 13/45 (29%)
KELCH repeat 122..159 CDD:276965 12/36 (33%)
muta_rot_YjhT 153..>352 CDD:274641 46/186 (25%)
KELCH repeat 163..212 CDD:276965 13/48 (27%)
Kelch_1 163..210 CDD:279660 13/46 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2576
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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